Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02315 ATGGTAGAGAGGCCTGCTGAAGAGATAGAGGTCCTTAATGGGGCAGATTTGGAAACTGAGGATTTTGATAGTGTTTTCCCTAGGCAGGCTAGTGAGCTTACTTCCGCTTTAGATGAAAAGTACTTACAATCAGGCTGGAATTTGAACAACTTCCCCAGGCTTCGTGAATCGGTGCTCTCTAATGAAACTAGTGATATTTCTGGTGTTTTAGTCATGGCTTTACATAAGGATGTGTTTTTCATCATTTTGTTTGGTGTGTCCCAAATCCTGGAGAGCTTGTGCTGCCCTATCCCAGGGCATATCGATCATTCGGGGTTCAACTCTAGCTTCAACTGCGCTGAGGCAGTTAATGTTGTACCAGTTGATTGGCTCCCGTATGGGCAGATTGCCATTGAGCTTTTTCGGGAACAGTCCCTCAGGACATCTATTTCCCATGATAAACTGTTGTATGGGGCTGCACGCGATGCAGTAGCAACACACTGGGAGCTTAATTTACTGAAGAATAATACTTTAGATAGCAAGGTATGA 528 0.4432 MVERPAEEIEVLNGADLETEDFDSVFPRQASELTSALDEKYLQSGWNLNNFPRLRESVLSNETSDISGVLVMALHKDVFFIILFGVSQILESLCCPIPGHIDHSGFNSSFNCAEAVNVVPVDWLPYGQIAIELFREQSLRTSISHDKLLYGAARDAVATHWELNLLKNNTLDSKV* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02315 175 Gene3D Cupin 99 164 - -
Pte6g02315 175 SUPERFAMILY Clavaminate synthase-like 97 161 - -
Pte6g02315 175 PANTHER LYSINE-SPECIFIC DEMETHYLASE 103 161 - -
Pte6g02315 175 Gene3D Cupin 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02315 Pte-Chr6 38672003 38673381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02315 1 80 JUMONJI Transcription Factor Family AT1G08620 55.556 1.49e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02315 K11446 - csv:101208186 124.79