Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02302 ATGACGGGGGCAAGTCATGATCCCACAAAGAAAAAGAAGAGAATAGCTGTTACCATTGTCTCTTCCTTCTTGCTGATCGGCATGGTGGTTGCCGTCACCGTCGGTATAGCCCTCTCTGAACACTCTAAACACGACAAGGGCAATGAACCTTCCACATCTATGAAAGCAATCAAAAACATTTGCCATAACACCGAGTACAAGGACGAATGTGTTCGGAGCTTAGAGGAAGAGGCTGACAACGCCACTGAGCCTAAACAACTAATCCAGGCTGCCTTCAGATCGGCAAAGAAGAAAATCCAGGAGGCAGCAAGGAAGTCGATCACCATCCAAGAGCTTGCCAAAGATCCCTTAACCAGGATGGCCGTTGATCAATGCATGGAGCTTGCCAATTTGTCTATCTCCGAGCTCGAGCGTTCTTCCCAAGAAGTGGCTAACCTTGAAGCCAGCAAAATCGATGAAATATTGCTCGATTTGAAGACTTGGCTCAGCGCTGCCTACACATACCAAAGTACTTGTCTTGATGGATTCGAAGGCACCGCCGGTGCGGCCTCTGAGAAAATGAAAGCCGCCTTGAAATCATCCATGGAGATGACCACCAACGGCGTTACCATGGTCTCCGAATTGCATAAAGCCTTAAACGACTACAACATTACCAACATGGCCGGTCGCCGCCGTCTCCTTGATGACGAAGATGCAGTACCTTCTTGGGTTGATAAACGCACGAGGAGACTCCTCGCTGCTGAAAATGCATTACATGAAGAGAAGCCTGACATTGTCGTGGCCAAGGACGGTAGTGGAAAATTCAAGACCATCAACGACGCAATCAAAGCAATCCCACCAAAGAGACCCGCTGGCAAACCTTTCATCATTCACATCAAGGAGGGTGTCTATGAGGAGCAGGTTAACATTTCTTCCGCCTTGAAGAACTTGGTGTTCATCGGAGATGGGCCTACGAAAACCCGTATCACATGCAACAGGAATTACAAACAGAACATCACCACATACCACACCGCCACTCTTGCTGTTAATGCGAATAACTTTATTGCAAAGAATATTGGTATCGAGAACTCAGCAGGTGCCGAAAACCATCAAGCCGTTGCATTAAGGTGTTCAGGCGACAATGCTGTCTTCCATAACTGCGCCATGGATGGATACCAAGACACGGTGTATGCACACGCCAAGCGCCAATTCTACAGGGATTGTACCATCTCCGGCACAATTGACTTCGTTTTCGGCAATGCACAATCTATCTTCCAGAACTGCACATTTGTGGTGCGCAAACCAATGGAGAACCAGGCATGCATTGTTACTGCACAGGGAAGGCAGAAGAAGAATGAGCCAACCGCCATCGTCCTCCAAGGTTGCCGAATTGTAGCTGACCCTGCCTACTATCCCGTGAGGTTCAAGAACAAGGCTTACCTTGCCAGGCCTTGGAAGGAATACTCCAGGGCCATCATCATGCACACTTTCATCGATGACTTGATTGCTCCCGAAGGATTCTTGGCATGGCAGGGTGACTTCGCACTTAAAACTCTTGTATACGTAGAACATGAAAACTACGGCCCTGGTGCAGACAAATCAAAACGTGTGAAATGGCATGGAATCAGAAGCATCACACCAGAAAGCGCCGACAAGTTTACACCACAAAATTACCTTGGGGGTGCTGCTTTTGTTATTGAGGCCAACGTGCCTATCGTCTCAGGAAGGATGCCCATGCCCATGCCCAAATCCAATTAA 1737 0.4824 MTGASHDPTKKKKRIAVTIVSSFLLIGMVVAVTVGIALSEHSKHDKGNEPSTSMKAIKNICHNTEYKDECVRSLEEEADNATEPKQLIQAAFRSAKKKIQEAARKSITIQELAKDPLTRMAVDQCMELANLSISELERSSQEVANLEASKIDEILLDLKTWLSAAYTYQSTCLDGFEGTAGAASEKMKAALKSSMEMTTNGVTMVSELHKALNDYNITNMAGRRRLLDDEDAVPSWVDKRTRRLLAAENALHEEKPDIVVAKDGSGKFKTINDAIKAIPPKRPAGKPFIIHIKEGVYEEQVNISSALKNLVFIGDGPTKTRITCNRNYKQNITTYHTATLAVNANNFIAKNIGIENSAGAENHQAVALRCSGDNAVFHNCAMDGYQDTVYAHAKRQFYRDCTISGTIDFVFGNAQSIFQNCTFVVRKPMENQACIVTAQGRQKKNEPTAIVLQGCRIVADPAYYPVRFKNKAYLARPWKEYSRAIIMHTFIDDLIAPEGFLAWQGDFALKTLVYVEHENYGPGADKSKRVKWHGIRSITPESADKFTPQNYLGGAAFVIEANVPIVSGRMPMPMPKSN* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02302 578 SMART PMEI_2 52 204 IPR006501 GO:0004857
Pte6g02302 578 ProSitePatterns Pectinesterase signature 2. 403 412 IPR033131 -
Pte6g02302 578 Gene3D Invertase/pectin methylesterase inhibitor family protein 51 210 IPR035513 -
Pte6g02302 578 SUPERFAMILY Pectin lyase-like 255 555 IPR011050 -
Pte6g02302 578 FunFam Pectinesterase 53 209 - -
Pte6g02302 578 PANTHER PECTINESTERASE 26 552 - -
Pte6g02302 578 Pfam Pectinesterase 257 554 IPR000070 GO:0030599|GO:0042545
Pte6g02302 578 Pfam Plant invertase/pectin methylesterase inhibitor 56 200 IPR006501 GO:0004857
Pte6g02302 578 Gene3D - 252 568 IPR012334 -
Pte6g02302 578 NCBIfam pectinesterase inhibitor domain 52 205 IPR006501 GO:0004857
Pte6g02302 578 CDD PMEI-like_3 60 210 - -
Pte6g02302 578 FunFam Pectinesterase 251 569 - -
Pte6g02302 578 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 55 208 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02302 Pte-Chr6 38544832 38546732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02302 1 570 Carbohydrate Esterase AT3G05610 49.912 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02302 K01051 - qsa:O6P43_011075 626.706