Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02297 ATGATGACCATGGAGGGAATGTTGGATAAAGGTGTATTAGATGATGTCATACGAAGACTACTAGAAGGAAAAGGAGGAAAACAGGTACAGCTTTACGAGGCAGAGATCCGGCAACTCTGTGTGAAGGCCCGCCAAATCTTCCTATCAGAACCAATCCTCCTTGAAATCCATGCTCCCGTCCGCATATGCGGTGATATTCATGGTCAGTACCAAGACTTACTCAGGTTCTTCGAGTATGGAGGCTACCCTCCTGCTGCGAACTATTTGTTTCTTGGGGATTACGTTGACAGAGGGAAGCAAAGTCTGGAGACAATATGTTTGCTTCTGGCCTACAAAATCCGATATCCTGACAAAATGTATCTCCTGAGAGGAAACCATGAGGATGCTAAAATAAACCGTATTTATGGTTTTTATGATGAGTGTAAAAGGAGGTTTAATGTTCGGCTATGGAAAATATTCTGCGACTGTTTCAATGCTTTGCCTGTGGCAGCACTCATTGAGGAGAAGATTCTGTGTATGCACGGCGGTCTCTCACCTGAGTTGAACAGTTTGGATCAGATAAAGGAAATTGCAAGACCTACTGACATTCCAGACAGTGGTCTTCTGTGCGATCTGCTATGGTCTGATCCTCAATCTAGAAATCAAGGATGGTCAGAGAGCGACAGAGGAGTCTCATGCACTTTTGGAGCTGATGTAGTTGAAGAGTTCTTAGACAAAAATGACCTTGACCTTATTTGCCGAGGACATCAGGTGGTGGAGGATGGGTATGAATTCTTTGCTAACCGAAGACTAGTCACTATCTTTTCTGCTCCAAATTATGGCGGGGAATTCGACAATGCCGGTGCACTGTTGAGTGTTGATGAGTCTCTTGTCTGTGCATTTGAGATATTGAAGCCAGCAACACCAAGTGATTCCAATATGGCCCTTAAGAAGGTAAATACTGTAATTAAAAGGGAAGAAGATACATATAATCACTTGCAATTTCGTTATATTCTTCATTTTCCGACGTATAATATTTTAGAATCAATTCATTTTGACAGCCGCCTAAAACTGGGAAGTGCTAACTCATTCCAGAAAGCCTCCAAGATTAATCAAATGAGGCTTGTTGATAAACTGTGCCGGAGCTATGCTATTACCTTTTTATATGCGTGA 1152 0.4236 MMTMEGMLDKGVLDDVIRRLLEGKGGKQVQLYEAEIRQLCVKARQIFLSEPILLEIHAPVRICGDIHGQYQDLLRFFEYGGYPPAANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKMYLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFCDCFNALPVAALIEEKILCMHGGLSPELNSLDQIKEIARPTDIPDSGLLCDLLWSDPQSRNQGWSESDRGVSCTFGADVVEEFLDKNDLDLICRGHQVVEDGYEFFANRRLVTIFSAPNYGGEFDNAGALLSVDESLVCAFEILKPATPSDSNMALKKVNTVIKREEDTYNHLQFRYILHFPTYNILESIHFDSRLKLGSANSFQKASKINQMRLVDKLCRSYAITFLYA* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02297 383 PRINTS Serine/threonine phosphatase family signature 59 86 IPR006186 GO:0016787
Pte6g02297 383 PRINTS Serine/threonine phosphatase family signature 121 145 IPR006186 GO:0016787
Pte6g02297 383 PRINTS Serine/threonine phosphatase family signature 155 181 IPR006186 GO:0016787
Pte6g02297 383 PRINTS Serine/threonine phosphatase family signature 184 211 IPR006186 GO:0016787
Pte6g02297 383 PRINTS Serine/threonine phosphatase family signature 263 279 IPR006186 GO:0016787
Pte6g02297 383 PRINTS Serine/threonine phosphatase family signature 88 115 IPR006186 GO:0016787
Pte6g02297 383 PRINTS Serine/threonine phosphatase family signature 241 261 IPR006186 GO:0016787
Pte6g02297 383 SMART pp2a_7 31 301 IPR006186 GO:0016787
Pte6g02297 383 Pfam Calcineurin-like phosphoesterase 60 251 IPR004843 GO:0016787
Pte6g02297 383 Pfam Serine-threonine protein phosphatase N-terminal domain 13 56 IPR031675 -
Pte6g02297 383 Gene3D - 7 308 IPR029052 -
Pte6g02297 383 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 18 306 - -
Pte6g02297 383 FunFam Serine/threonine-protein phosphatase 4 309 - -
Pte6g02297 383 ProSitePatterns Serine/threonine specific protein phosphatases signature. 122 127 IPR006186 GO:0016787
Pte6g02297 383 SUPERFAMILY Metallo-dependent phosphatases 26 304 IPR029052 -
Pte6g02297 383 CDD MPP_PP1_PPKL 12 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02297 Pte-Chr6 38522104 38524608 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02297 60 247 Calmodulin-binding Proteins AT5G63870 34.375 2.19e-30 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02297 K06269 - twl:120000793 570.081