Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02285 ATGGATCAGCAAGGGCATAATCAGACCTCTTCCATGGGGGTTGCTAGTGGAGCTCAATTAACATATGGCTCTAATCCATACCAGTCCAACCACTTGGATGGCGCACCAACTGGAGCTGTTGTGACATCTGGTGGGGCTATGCAGCCTGTAAGTCAGCCTGCTGGAGCTCAACTGGCACAACATCAACTTGCTTATCAGCATATCCATCAGCAACAGCAACAGCAACTTCAGCAACAACTGCAAGCCTTTTGGTCAAATCAATACCAAGAAATTGAGAAGGTAGCTGATTTTAAGAATCATAGCCTTCCATTAGCGAGGATTAAGAAGATTATGAAAGCTGATGAAGATGTTAGAATGATATCAGCTGAGGCTCCTGTAATATTTGCCCGGGCATGTGAAATGTTCATATTGGAGCTGACTTTACGATCTTGGAATCATACTGAAGAGAACAAAAGGCGAACGCTTCAAAAGAACGACATTGCGGCAGCTATAACCAGGACTGATATCTTTGACTTTTTGGTTGACATTGTGCCGAGAGAGGATTTGAAAGATGAGGTACTCACATCCATGCCGAGGGGAACAATGCCTGCTGGACCTGCTGATGCTATTCCATATGTCTATATGCCACCTCAGCACGCACCCCAGGTTGGAGCAGCTGGTATGATTATGGGTAAACCCGTGATGGACCCATCCGTTTATGCCCAACAGCCTCATCCATACACGGCTCAGCAATTGTGGACACATCCGCCAGAACAGCCACAAGCGTCTTCTGATCGCTAG 780 0.4667 MDQQGHNQTSSMGVASGAQLTYGSNPYQSNHLDGAPTGAVVTSGGAMQPVSQPAGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWSNQYQEIEKVADFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSMPRGTMPAGPADAIPYVYMPPQHAPQVGAAGMIMGKPVMDPSVYAQQPHPYTAQQLWTHPPEQPQASSDR* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02285 259 FunFam Nuclear transcription factor Y subunit gamma 66 179 - -
Pte6g02285 259 SUPERFAMILY Histone-fold 70 173 IPR009072 GO:0046982
Pte6g02285 259 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 62 201 - -
Pte6g02285 259 MobiDBLite consensus disorder prediction 236 259 - -
Pte6g02285 259 Gene3D Histone, subunit A 63 179 IPR009072 GO:0046982
Pte6g02285 259 MobiDBLite consensus disorder prediction 232 259 - -
Pte6g02285 259 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 101 164 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02285 Pte-Chr6 38426597 38429064 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02285 1 246 CCAAT-HAP5 Transcription Factor Family AT1G08970 60.729 7.85e-92 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Pte6g02285 CBFD_NFYB_HMF 5.7e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02285 K08066 - pvy:116113415 385.956