Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02274 ATGGGTGGTCACAAAAAGGTTTCAGCTAGGGTTTCAGACGACCCTGACGAATTATCTCGTGTATCTTTCCAGGCCATTCTTCTTGCTGATAGTTTTGCCACTACATTCAGACCAATCACACTCGAACGACCCAAAGTACTATTGCCTCTTGTAAATGTTCCAATGATAAATTATACATTATCATGGCTCGAATCTGCTGGTGTTGAGGAGGTTTTTGTTTTCTGCTGTGCTCATTCAAAGCAAGTAATTGATTATTTGGAGAAAAATGGATGGCTCGCTCAACCAAATTTTACAGTCACGACAATTGAGTCCCACAACTCTGTTAGTGCTGGAGATGCCTTGCGGTTGATTTATGAGCACAATGTGATACATGGTGACTTTGTGCTCATCAGCGGAGATACAGTAAGCAACATGTCACTTACACGGGCACTCCAAGAACACAAGGATAGAAGGAAGAAAGATAATAATGCTGTGATGACCATGGTCATCAAACAATCCAAACCTAATCAAGCTATTCATCAATCTCGACTTGGCACTGATGAACTTTTCATGGCTATAGACCCTGATACGAAGCAGCTTTTGTATTATGAAGACAAGACAGATTTTAAAGGGACAATATGTCTTGATAAGTCTTTGCTGGCTGAGAATCCGTCCATCTCTCTGCAAAATGACAAGCAGGATTGTTATATAGATATCTGCTCACCAGAAGTCCTCAGTCTGTTTACGGACAACTTTGACTATCAACATCTACGGCGCCATTTCGTAAAAGGACTGCTTGTTGATGATATAATGGGATACAAAATATTCATCCATGAAATCCACTCAAGCTATGTGGCAAGGATTGACAACTTCCGAAGCTATGATACTGTCAGCAAAGATATAATCCACAGGTGGACTTACCCATTAGTGCCAGATCTCATGTTGTTTGGCAGTGCAATGACTAAACTTGACAGACAAGGAATATACCGAGCATCGGAAATAGCGCAGTCACGTTCTGCAATGGTTGGCCCTTTTACTGTAATTGGACGTGGCACAAAAATTGGCGACAATACAAAAATCTCAAACTCAGTTATTGGGGAAGGGTGTTCTATCGGATCAAATGTTTGCATAGAGGGTTCCTATGTGTGGAACAATGTTAGCATTGAAGATGGCTGTGAACTTAGACATGCAATTGTATGTGAAGGAGTAACTGTAAAGTCAAGAGCTGTTCTAGAACCTGGTTCTGTGCTATCTTTCAAGGTTGTAATAGGGCAGCAGACTGTGGTTCCAGCATACTCAAAGGTATCGTTATTACAACAACCAATGACACAAGATAGTGATGAGGAGCTGGAATATGCTGACAGCAGTAGTGCCATGACAAGTACATTGGACAAGTCTAATGGAGAGATAACATCGGAAGCATCTGAGTCACAACATTGGTCTGGTCATGAGCTCGGAGTGGGTGGAGTTGGTTATGTTTGGTCAAGTGGTGATGGAGGACTTGAAGAAGAATGGAGGCATTCAGTAGCGCCCCTTCCTACTGATAAAGTTGCAGAGGCAAGGAAAGCCATAGAGGAAGGTATGGAGTTAACTCAGGATGACAGTGTTCTTCCAACTCGAGAATTGCAATCTTGCTCTAATGATTCGGGTGATGATGATAATGAAGATTTGAGGGATGAATCCTTGTACTTTGAGAAAGAGGTTGAAGCAACTTTCCAAAGGGCTGTGCATGAAAATATAAAGGAAGACATAGTAATCTTGGAAGTGAACTCGTTAAGGTTGTCTTACAATAAGGTGGCAGCAGACTGCGCTGGAGCTTTATTTTATTCTATGATGAGATTGGCTTTAGAAAGTTCGTACAATTCAACTAATGAGTTATTTGGGAATATTAAGAGCATAATTACAAAATGGAGAAAGGTTCTGAAATCCTATCTAACGGATGTAGATGATCAGATTGAAGTAATACTTAAATTTGAAGAGATTTGTTCGGAATCTGGAAAGGAGTTCGCTCCATTGTTCACACAGATACTGTCCTTCCTATATGATAGAGAAATTGTCGAGGAAGATGCTCTTTTGAGTTGGGAGGAAGAAAAACGAGAAGCGGACGACTCGGATAAAGTGTTTGTAACGCAGGCTCAAGCATTTATTCAATGGTTAAGAGAAGCATCAGAGGAAGAAGACGAGGATTAG 2169 0.4103 MGGHKKVSARVSDDPDELSRVSFQAILLADSFATTFRPITLERPKVLLPLVNVPMINYTLSWLESAGVEEVFVFCCAHSKQVIDYLEKNGWLAQPNFTVTTIESHNSVSAGDALRLIYEHNVIHGDFVLISGDTVSNMSLTRALQEHKDRRKKDNNAVMTMVIKQSKPNQAIHQSRLGTDELFMAIDPDTKQLLYYEDKTDFKGTICLDKSLLAENPSISLQNDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLVDDIMGYKIFIHEIHSSYVARIDNFRSYDTVSKDIIHRWTYPLVPDLMLFGSAMTKLDRQGIYRASEIAQSRSAMVGPFTVIGRGTKIGDNTKISNSVIGEGCSIGSNVCIEGSYVWNNVSIEDGCELRHAIVCEGVTVKSRAVLEPGSVLSFKVVIGQQTVVPAYSKVSLLQQPMTQDSDEELEYADSSSAMTSTLDKSNGEITSEASESQHWSGHELGVGGVGYVWSSGDGGLEEEWRHSVAPLPTDKVAEARKAIEEGMELTQDDSVLPTRELQSCSNDSGDDDNEDLRDESLYFEKEVEATFQRAVHENIKEDIVILEVNSLRLSYNKVAADCAGALFYSMMRLALESSYNSTNELFGNIKSIITKWRKVLKSYLTDVDDQIEVILKFEEICSESGKEFAPLFTQILSFLYDREIVEEDALLSWEEEKREADDSDKVFVTQAQAFIQWLREASEEEDED* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02274 722 CDD LbH_eIF2B_epsilon 340 418 - -
Pte6g02274 722 ProSiteProfiles W2 domain profile. 547 722 IPR003307 GO:0005515
Pte6g02274 722 SUPERFAMILY ARM repeat 557 715 IPR016024 -
Pte6g02274 722 Pfam eIF4-gamma/eIF5/eIF2-epsilon 643 722 IPR003307 GO:0005515
Pte6g02274 722 CDD eIF-2B_epsilon_N 23 238 IPR035543 -
Pte6g02274 722 Gene3D Hexapeptide repeat proteins 319 455 - -
Pte6g02274 722 FunFam Translation initiation factor eIF-2B epsilon subunit 547 722 - -
Pte6g02274 722 SUPERFAMILY Trimeric LpxA-like enzymes 268 428 IPR011004 -
Pte6g02274 722 SUPERFAMILY Nucleotide-diphospho-sugar transferases 22 368 IPR029044 -
Pte6g02274 722 MobiDBLite consensus disorder prediction 521 549 - -
Pte6g02274 722 FunFam Trimeric LpxA-like enzyme 315 448 - -
Pte6g02274 722 Pfam Nucleotidyl transferase 25 167 IPR005835 GO:0009058
Pte6g02274 722 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 9 721 - -
Pte6g02274 722 MobiDBLite consensus disorder prediction 436 474 - -
Pte6g02274 722 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 13 302 IPR029044 -
Pte6g02274 722 Gene3D - 545 722 - -
Pte6g02274 722 CDD W2_eIF2B_epsilon 552 720 IPR044123 GO:0005085|GO:0031369
Pte6g02274 722 MobiDBLite consensus disorder prediction 446 472 - -
Pte6g02274 722 SMART 542_3 631 718 IPR003307 GO:0005515
Pte6g02274 722 FunFam Translation initiation factor eIF-2B subunit epsilon 12 302 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02274 1 716 Eukaryotic Initiation Factors Gene Family AT2G34970 63.950 0.0 938
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02274 K03240 - qsa:O6P43_011161 1121.69