Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02260 ATGGCATCGGAGCAACTGAGCGCAGTTTTTCACGAAGAAGATCTCGATGATGAGGACAACGAGTCTCCCGAAGACGAAGAAGACCTTGACGACGACGACGTTTTGGGCGTTCCCGAAGATGAAGATGACAAGGACAACGAACCTTCGCCTTCTTCTACGGTTGCCATTCCCACTGTTTCAGCTGCTGTCCCAGTTATTGTTCCAGCCTCCGCTCCTCTCAATGTAGATGGCACTCGAATTCAGACCTTTACGACAGTTATCGCGTCGGATTCCTCCGATCGAAAACGGCAGCGAGCGGAGCCGAGCGACGAGAAGAAGCCCTTGGATGATTCCCGTAGGCTCTTTCAACGACTGTGGACTGACGAGGATGAGATCGAACTCTTACAGGGGTTCCTTGAATATTCAACGCAACGAGGTAGTTCTCACCACAACGATACGTCGCAGTTCTACGACCAAATCAAGTCCAAGCTTCAGCTCGATTTTAATAAGAACCAGCTGGTTGAGAAGCTTCGGAGGTTGAAAAAAAAGTACCGAAATGTTATCAACAAGATCAATTCTGGTAAGGAATTCTCCTTCAAAAGCCCTCATGATCAAGCTACCTTTGAAATTTCTCGTAAGATCTGGAGTAATATTGGTCAAATTGGGTGTGGAAATGCTGACGACAATGCCTTGGATGATGATGAGCTTAACCCTAATCCTAACTCTAATCCCAACACTAACTATAGTCCATCATTGGTTATTAAGAGTGAGGAAATTGTTGTCAATAGAACTCCTACATCTAAGAAACGATCACGGTCTAAGACTGGGATGAAAATTGATGAGAAGCGTGTCTTCAGTGACGGGCTGGCTTCAGGCAAAGATAGCAACTTCATCGCTGTTACGAGTAGCAATTGTGATAACAATACTGGTAACTTGAACATTCCGGGTCTGATTGAGGAAACGGTTAGGAGTTGTCTGTCGCCCTTGTTCAAGGAATTGTTCACCACTGCTATGGGAGGAGGACAGGTTGGTGCAAGAGGGCTTGGGGCATTGCAGATAAATTTGATGCCGTTGGGTTTGGGGGGACCTTCCATGTTGAATTTTGAGAATGGGACTGTAATGGATGAGAAGTGGAGGAAACAACAGATTTTGGAGTTGGAGGTATATTCAAGGCGGTTAGGATTGGTTCAGGAACAGATTAAGGCTGCATTGGATGAGTTGAGATCGACCGGAGGATAA 1218 0.4606 MASEQLSAVFHEEDLDDEDNESPEDEEDLDDDDVLGVPEDEDDKDNEPSPSSTVAIPTVSAAVPVIVPASAPLNVDGTRIQTFTTVIASDSSDRKRQRAEPSDEKKPLDDSRRLFQRLWTDEDEIELLQGFLEYSTQRGSSHHNDTSQFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVINKINSGKEFSFKSPHDQATFEISRKIWSNIGQIGCGNADDNALDDDELNPNPNSNPNTNYSPSLVIKSEEIVVNRTPTSKKRSRSKTGMKIDEKRVFSDGLASGKDSNFIAVTSSNCDNNTGNLNIPGLIEETVRSCLSPLFKELFTTAMGGGQVGARGLGALQINLMPLGLGGPSMLNFENGTVMDEKWRKQQILELEVYSRRLGLVQEQIKAALDELRSTGG* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02260 405 PANTHER BNAANNG10740D PROTEIN-RELATED 16 399 IPR007592 GO:0006355
Pte6g02260 405 MobiDBLite consensus disorder prediction 11 46 - -
Pte6g02260 405 MobiDBLite consensus disorder prediction 228 242 - -
Pte6g02260 405 MobiDBLite consensus disorder prediction 89 109 - -
Pte6g02260 405 MobiDBLite consensus disorder prediction 222 242 - -
Pte6g02260 405 MobiDBLite consensus disorder prediction 91 109 - -
Pte6g02260 405 Coils Coil 163 183 - -
Pte6g02260 405 Pfam Protein of unknown function, DUF573 115 209 IPR007592 GO:0006355
Pte6g02260 405 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02260 Pte-Chr6 38238548 38239765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02260 46 402 GeBP Transcription Factor Family AT5G28040 48.691 2.35e-95 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Pte6g02260 DUF573 9.8e-35 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02260 - - qsa:O6P43_011183 420.624