Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02257 ATGGCGCTTCCACCTAGCCTTCTTTCTGATGAGGCAAGCCCTGAATGGATGAACAAGGCTGATAATGCCTGGCAGCTCGCAGCAGCAACCTTTGTAGGCCTCCAAAGCATACCAGGCCTAGTCATCCTATATGGGAGCCTTGTTAATAAGAAATGGGCAGTTAATTCTGCTTTCATGGCATTCTATGCCTTTGCTGCTTCACTTATTTGCTGGGTTGGATGGGCTTACCGCATGTCATTCGGAGAGAAATTAGTGTTCTTCTTAGGCAAACCAGGTGTAGCTTTGGACCAAAAGTATCTCTTAGACAAAGCTTTTCTCGGCTTGTTTCCAACAGCTACTATGGTGTTCTTCCAAGGTGTGTTTGCTGGGATCACGTTGATCTTGATAGCGGGTGCATTACTAGGAAGGATGAACATTCGTGCTTGGATGTTGTTTGTCCCACTGTGGATTACCTTCTCTTATCCTGTGCCTGCTTTTAGTATTTGGAGCCCACAGGGGTGGCTAGCAAAACTTGGGATAATTGATTATTCAGGAGGTTATGTCATTCACCTCCCTGCAGGGGTTGCTGGTTTTACAGCAGCTTATTGGGTAGGTCCAAGACGAGAGAAGGACATAGTAAACTCTGCGCCGAACAACATTGTTCTGATGCTTGCGGGTGCAGGACTGCTATGGATGGGTTGGGGTGGATTTAACGGTGGAGGTCCCTTTGTGGTGAGCAGCGATTCATCCCTTGCTGTACTCAACACTCACGTCTGTACTGCTGCTAGCATTGTGACATGGATCATCCTTGACATCACATTCTTTGGATCACCCACCGTTAATGGGGCTGTACAGGGCATGATCACTGGCCTCGTTTGCATCACTCCCGCTGCAGGAGTAGTGCAAGGATGGGCAGCCATCATAATGGGTGTAATGTCAGGAAGCATTCCATGGTTCACCATGATTGTGCTACATAATAAGGTCTGGTTCTTGAGGCAAATTGACGACCCATTGGCAGTCTTCCACACTCATGCCATTGCTGGAGCTCTTGGTGGGATTCTCACTGGCCTCTTTGCCGAGCCTAAGTTGTGCCGTCTGTTTTATATGGTGCCTGATTGGGAAAAGTACACTGGCTTACTCTACGGCTTTCAAAGTGGAAGAACGTCAGCCGGCCTTAACCAGTTTGGGTTGCAACTGGCTGGTATGGTTTTTGTTGTTGTCTATAACATCGTCATCACCAGCTTGATTTGTATGCTGATAAGCTCGATTGTACCACTCAAGCTCGAGGAGGATACACTTAGAATTGGTGACAAGGCAATACATGGAGAGGAAGCCTTTGTTATGCTGAGTGAGGTAAGTGAAAGGTTTGACATTTCAAAAAACAATAAACTTTATGACACTGAAATATCGTCAACATCAACTGGTGTAGTTCAGATGGCTTCATCATATGTATATCGAAGCTGA 1443 0.465 MALPPSLLSDEASPEWMNKADNAWQLAAATFVGLQSIPGLVILYGSLVNKKWAVNSAFMAFYAFAASLICWVGWAYRMSFGEKLVFFLGKPGVALDQKYLLDKAFLGLFPTATMVFFQGVFAGITLILIAGALLGRMNIRAWMLFVPLWITFSYPVPAFSIWSPQGWLAKLGIIDYSGGYVIHLPAGVAGFTAAYWVGPRREKDIVNSAPNNIVLMLAGAGLLWMGWGGFNGGGPFVVSSDSSLAVLNTHVCTAASIVTWIILDITFFGSPTVNGAVQGMITGLVCITPAAGVVQGWAAIIMGVMSGSIPWFTMIVLHNKVWFLRQIDDPLAVFHTHAIAGALGGILTGLFAEPKLCRLFYMVPDWEKYTGLLYGFQSGRTSAGLNQFGLQLAGMVFVVVYNIVITSLICMLISSIVPLKLEEDTLRIGDKAIHGEEAFVMLSEVSERFDISKNNKLYDTEISSTSTGVVQMASSYVYRS* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02257 480 Gene3D Ammonium transporter AmtB like domains 7 455 IPR029020 -
Pte6g02257 480 ProSitePatterns Ammonium transporters signature. 175 200 IPR018047 GO:0008519|GO:0016020|GO:0072488
Pte6g02257 480 SUPERFAMILY Ammonium transporter 16 420 - -
Pte6g02257 480 FunFam Ammonium transporter 6 442 - -
Pte6g02257 480 PRINTS Rhesus blood group protein signature 118 134 IPR002229 GO:0005886
Pte6g02257 480 PRINTS Rhesus blood group protein signature 245 267 IPR002229 GO:0005886
Pte6g02257 480 PRINTS Rhesus blood group protein signature 214 232 IPR002229 GO:0005886
Pte6g02257 480 PANTHER AMMONIUM TRANSPORTER MEP2 8 445 IPR001905 GO:0008519|GO:0016020|GO:0072488
Pte6g02257 480 Pfam Ammonium Transporter Family 23 438 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02257 Pte-Chr6 38224282 38226165 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02257 112 473 Inorganic Solute Cotransporters AT2G38290 52.210 1.88e-121 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02257 K03320 - gmx:100782944 674.085