Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02253 ATGGCAAGCAATTCTTCAGAGGGGCTTGGTGATGATTTCTTTGAGCAGGTGTTAGATGTGCCCTCTCCTTACTCAAACTCAGAGGTAACAGGGAACGGAAGGGCTGGAGCTGATGATATAGGCGCCATGCAAATGGTGTTGCAGTTTGACGATGGTTCTGGTAGTAGTGGTAATGGGTTGAGAGGGGTTGAGTCTACTGGTTTGGGCATGCCTATTGGATTGAATATGGAACAAAGGTTCTTGGGAAGTGACCAAGATGGTGGCAGAAGCTTCAAGTTCAACAATGGAATTACGGAAGGCAATAATACCCACCATCACCGTATGATTATGAACCATAACAATAGCACCACTACCACGTCTATTTCCAATTCAGCCATGACTGGAATCAGAGAGAGGGAGTCGGTACATATGACAAGTTTGTTCCCCGTGTTTGGTCAGTTGCAGTGTCAGGCATTACGGCCAACAGTATCGCCGCCATCACCGCCACCACAAGCACAACTCCAGCAGCCCTTTCAACATCAACCACTGACTCCCGGCTCTGCTGCTGCTACACCTGCACCTCCACCACCTACCATTCGCCCAAGAGTCCGAGCAAGACGAGGACAAGCCACAGATCCCCACAGTATTGCTGAGCGACTACGCAAGGAAAGGATTGCTGAAAGAATGAGGCATTGTAGGAATTGGTTCCAAGTGCAGATAAGACTGATGCTTGTGAAGACTGATAGAGCAGCGATGCTTGATGAAATTGTGGCCTACGTCAAGTTCCTCAGACTTCAAGTTAAGGTTTTGAGCATGAGTAGGTTGGGTGGAGCAGGTGCAGTAGCTCAGCTTGTGGCAGATGTTCCCTTGTCGACAAGGGAGGCATGGGAAAAATGGTCAAATGACGAAACAGAGCAACAAGTAGCGAAACTCATGGAAGAAGACGTCGGAGCTGCTATGCAATTCCTTCAGTCGAGAGCACTTTGCATTATGCCAATATCTCTAGCCTCAGCAATTTTTCCCATGTCTCAACCAGATGCACCAAATCAAAAGCGAATCAAACAACTTCCCGTGAAAAAGGAAGAGGAATCTGGTGAATGCAGCCTCTCGTCAGCTTGTCAAGTTTTGAAGCAAGGGAGTGGCGTCATGCCTACCTTGGGAGGAAAATTCAAATCTCTCTCTCTCGGTCATGGTTACTCTGAAGATTTTTAA 1191 0.4769 MASNSSEGLGDDFFEQVLDVPSPYSNSEVTGNGRAGADDIGAMQMVLQFDDGSGSSGNGLRGVESTGLGMPIGLNMEQRFLGSDQDGGRSFKFNNGITEGNNTHHHRMIMNHNNSTTTTSISNSAMTGIRERESVHMTSLFPVFGQLQCQALRPTVSPPSPPPQAQLQQPFQHQPLTPGSAAATPAPPPPTIRPRVRARRGQATDPHSIAERLRKERIAERMRHCRNWFQVQIRLMLVKTDRAAMLDEIVAYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLSTREAWEKWSNDETEQQVAKLMEEDVGAAMQFLQSRALCIMPISLASAIFPMSQPDAPNQKRIKQLPVKKEEESGECSLSSACQVLKQGSGVMPTLGGKFKSLSLGHGYSEDF* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02253 396 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 65 330 - -
Pte6g02253 396 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 202 256 IPR011598 GO:0046983
Pte6g02253 396 Gene3D - 199 270 IPR036638 GO:0046983
Pte6g02253 396 MobiDBLite consensus disorder prediction 152 208 - -
Pte6g02253 396 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 200 266 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02253 Pte-Chr6 38193893 38204313 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02253 171 339 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 64.130 3.04e-59 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02253 - - qsa:O6P43_007633 324.324