Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02243 ATGAGTGACCCTCGGGTATCACCAATGAAGCCTCCTCTTGTTCCACTTGCTGCTCTAATTGGTCGTGAGCTTAGGAATGATAAGGTTGAGAAACCTCTTGTAAAGTATGGGCAGGCAGGTTTGGCAAAAAAGGGGGAGGATTCTTTTCTGATAAAGACTAATTGCCAAAGAGTTCCCGGTGATTCTTCAACATTATTTTCTGTCTTTGCGATTTTTGATGGGCATAATGGAATGTCAGCAGCAGTTTACGCAAAGGATAAATTATTGAACAATGTTATGAGTGCCATTCCTCAAGAAATCAGCAGGGACGAGTGGCTTCAAGCTCTTCCTGGGGCATTAGTTGTGGGTTTTGTGAAGACTGACATAGAATTTCAGCAGAAAGGAGAAACATCAGGAACTACTGCTACATTGGTTGTAATTGACGATTGGACTGTGACTGTTGCATCTGTTGGGGATTCTCGCTGTATATTGGATGCACGGGGAGTTGATCACAGGCTGGAGGAGAATGAGGAAGAGAGGCAGCGCGTCGCTGCCAGTGGCGGTGAAGTTGGAAGACTTAATATCTTTGGAGGCAATGAGGTCGGACCCCTCCGTTGTTGGCCTGGAGGTTTATGTCTTTCTAGATCCATTGGTGACACTGATGTGGGAGAATTTATTGTGCCAATTCCATATGTTAAACAAGTCAAGCTCTCAAATGCAGGGGGAAGGCTTATCATAGCTTCTGATGGTATCTGGGATGCATTGTCTTCTGATATGGCTGCAAAGTCTTGTCGGGGTCTACCTGCTGAGCTTGCTGCAAAGTTGGTTGTAAAGGAGGCTTTGAGGTCCAGGGGTCTGAAGGATGATACAACATGCCTTGTTGTCGACATAATCCCTGCAGACCTTCCTATCTTGCCACCAACACCTAGGAAAAGAAATAATGTGCTTACTTCATTACTATTTGGGAAAAAATCTCTGATTCCAGAAACCAAATCTTCTAAACCCCCTGCTAAGAATGTTGTGGAGGAACTATTTGAAGAAGGCTCTGCGATGCTCGTAGAAAGGCTGGGCAAGGATTTTTCGTTTAATGCAAACTTAGGGAGATTTCGCTGTGCAGTCTGCCAAGTGGTCAAACACCTACGGATAGCTTATCAGCGAATTCAGGAGCTTTTTTCTCACCTACTTCTAAGCAATGGGAAGGTCCATTCCTGTGCATGA 1197 0.4486 MSDPRVSPMKPPLVPLAALIGRELRNDKVEKPLVKYGQAGLAKKGEDSFLIKTNCQRVPGDSSTLFSVFAIFDGHNGMSAAVYAKDKLLNNVMSAIPQEISRDEWLQALPGALVVGFVKTDIEFQQKGETSGTTATLVVIDDWTVTVASVGDSRCILDARGVDHRLEENEEERQRVAASGGEVGRLNIFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPYVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPADLPILPPTPRKRNNVLTSLLFGKKSLIPETKSSKPPAKNVVEELFEEGSAMLVERLGKDFSFNANLGRFRCAVCQVVKHLRIAYQRIQELFSHLLLSNGKVHSCA* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02243 398 Gene3D - 35 293 IPR036457 -
Pte6g02243 398 CDD PP2Cc 43 290 IPR001932 -
Pte6g02243 398 SMART PP2C_4 23 288 IPR001932 -
Pte6g02243 398 Pfam Protein phosphatase 2C 46 273 IPR001932 -
Pte6g02243 398 SMART PP2C_SIG_2 46 290 IPR001932 -
Pte6g02243 398 PANTHER PROTEIN PHOSPHATASE 47 289 IPR015655 GO:0004722|GO:0006470
Pte6g02243 398 FunFam probable protein phosphatase 2C 5 35 295 - -
Pte6g02243 398 ProSiteProfiles PPM-type phosphatase domain profile. 28 290 IPR001932 -
Pte6g02243 398 SUPERFAMILY PP2C-like 39 290 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02243 Pte-Chr6 38125030 38128121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02243 1 369 PP2C-type Phosphatase Gene Family AT1G09160 72.149 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02243 - - qsa:O6P43_007451 611.298