Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02233 ATGGTCACGTTGGGAGAGCGAACATGCAAGTTCGATGCTGCTGGAGCCCTCGGCAAGTATGGTATTATTTGCGTGGAGGATCTTATTCATGAGATCATGACAGTGGGACCTCACTTCAAGGAGGCAAACAACTTTCTCTGGCCTGTTAAGCTGAAGGCACCCTTGGATTGTCTTAAGAAGAAGAGGAATCACTGTGTTGAAGGAGGATATGCTATGTGGCAGAATAGGAGCACTCAATTATAA 243 0.4609 MVTLGERTCKFDAAGALGKYGIICVEDLIHEIMTVGPHFKEANNFLWPVKLKAPLDCLKKKRNHCVEGGYAMWQNRSTQL* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02233 80 SUPERFAMILY Ribosomal protein L30p/L7e 18 74 IPR036919 -
Pte6g02233 80 PANTHER 60S RIBOSOMAL PROTEIN L7 16 79 IPR039699 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02233 Pte-Chr6 38056222 38057230 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02233 16 71 Cytoplasmic Ribosomal Protein Gene Family AT2G44120 87.500 1.65e-30 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02233 K02937 - rvl:131306741 107.071