Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02232 ATGGTGAACCAAGAGGAACAACTGGTGCAAAAGGTCTGTGATTTGTTTGATCAAATCTCAAGCCTCGAGAGTCTGAAACCCTCGAAGGATGTCAACATGCTTTTCACTCAACTTGTACTCACATGCATGCCACCTAGTCCAATTGATGTTGTCAAGCTGAGCAAAAGGGCGCAAGAGATGAGAAGCAAGCTTATAAAACTGTGTGGAGAAGCGGAAGGACTTTTGGAGAGTCATTATTCAGACATCCTGGGATCTTACCAGAATCCCCTTGACCATTTAAACCTTTTCCCTTACTATTCAAATTACCTCAAACTCGGTTTCCTTGAGTTCTCAATTCTTAAGCAGCACTATGCTCATGTCCCTAGCAAAATTGCCTTCGTGGGTTCAGGTCCTCTTCCCTTCACTTCAATTGTCCTGGCAACCCAGCACCTCCCGTCGACCACCTTTCACAACTATGACATCGACTCTTCAGCCAATGCACAGGCACTTCGCTTAGTTTCATCCGATCTCGACCTGTCAGAAAGGATGACTTTCCGCACCGCTGACATAATGAATGTCACCACTGCTTTGAAAGACTACGATGTTGTTTTTTTGGCAGCACTGGTGGGCATGGATTTGGAGGTCAAGATTCAAATCATTTCTCATCTGGCTAAGCACATGGCTCCTGGGGCACTTTTGATGCTTCGAAGTGCACACGGTGCTCGAGCGTTTCTGTACCCAGTCGTGGATCCTTGTGATCTTCGAGGGTTCGAAGTGCTGTCTGTGTTCCACCCTACGGATGAGGTTATTAATTCTGTTGTCATCGCACGTAAGTTTTCGACACTCCCAATAAAACAGCATCAGCAAGGGCACGCTTCCCTAAAATTTCCAAACAAGTGCTCCGAAGTTGAAGCATTCAGTCCTCTCAACCATGGGAACATGATTGAGGAAGTTACCATTGAGGAGTGA 948 0.461 MVNQEEQLVQKVCDLFDQISSLESLKPSKDVNMLFTQLVLTCMPPSPIDVVKLSKRAQEMRSKLIKLCGEAEGLLESHYSDILGSYQNPLDHLNLFPYYSNYLKLGFLEFSILKQHYAHVPSKIAFVGSGPLPFTSIVLATQHLPSTTFHNYDIDSSANAQALRLVSSDLDLSERMTFRTADIMNVTTALKDYDVVFLAALVGMDLEVKIQIISHLAKHMAPGALLMLRSAHGARAFLYPVVDPCDLRGFEVLSVFHPTDEVINSVVIARKFSTLPIKQHQQGHASLKFPNKCSEVEAFSPLNHGNMIEEVTIEE* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02232 315 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 259 IPR029063 -
Pte6g02232 315 CDD AdoMet_MTases 153 228 - -
Pte6g02232 315 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Pte6g02232 315 PANTHER NICOTIANAMINE SYNTHASE 3 3 303 IPR004298 GO:0030410|GO:0030418
Pte6g02232 315 Pfam Nicotianamine synthase protein 3 272 IPR004298 GO:0030410|GO:0030418
Pte6g02232 315 Gene3D Vaccinia Virus protein VP39 6 273 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02232 Pte-Chr6 38055157 38056104 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02232 1 315 Nicotianamine Synthase Gene Family AT1G09240 61.950 2.87e-136 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02232 K05953 - qsa:O6P43_007426 488.804