Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02222 ATGGCATCAACAGGCTTGGCGCCTAATTCTGGCGTTAGAGATGCCTCTGGCTATACAACAGGTGCTGATCGACTGCCAGAGGAGATGAGTGATATGAAAATCAGAGATGACAAAGAAATGGAAGCAGCAGTGGTTGATGGTAATGGGACGGAGACAGGTCACATAATTGTGACAACTATAAATGGTAAAAATGGTCAACTGAAGCAGACCATTAGCTATATGGCAGAGCGTGTTGTTGGACATGGATCCTTCGGAGTCGTTTTCCAGGCTAAATGTCTTGACACTGGTGAAACTGTGGCGATTAAAAAGGTTCTTCAAGACAAGAGATACAAGAACCGGGAGCTTCAGACAATGCGTCTTCTTGACCATCCAAATGTCATCTCTCTGAAGCATTGTTTCTTTTCCACGAGTGATAAGGATGAGCTATATCTCAATTTAGTACTCGAGTATGTCCCTGAAACTGTACATCGTGTAATCAAGCACTACAAGAAGTTGAATCAGAGGATGCCACTGATTTATGTGAAACTCTATGCATATCAGATCTTTAGAGCTCTTTCTTACATTCACAGGAGCATTGGAGTTTGCCATCGGGATATCAAACCTCAAAATCTTTTGGTTAATCCACATACCCACCAGGTTAAATTATGTGACTTTGGAAGTGCAAAAGTCTTGGTAAAAGGGGAGCCGAATATATCTTACATATGCTCTAGGTATTATAGAGCACCTGAGCTTATATTTGGAGCAACTGAGTATACAACAGCGATTGACATCTGGTCAGCTGGATGCGTATTGGCAGAGTTGATGCTTGGTCAGCCTTTATTTCCTGGTGAGAGCGGCGTTGATCAGCTTGTTGAGATCATAAAGGTAAAATATCTAATTCCTTTTTAA 888 0.4178 MASTGLAPNSGVRDASGYTTGADRLPEEMSDMKIRDDKEMEAAVVDGNGTETGHIIVTTINGKNGQLKQTISYMAERVVGHGSFGVVFQAKCLDTGETVAIKKVLQDKRYKNRELQTMRLLDHPNVISLKHCFFSTSDKDELYLNLVLEYVPETVHRVIKHYKKLNQRMPLIYVKLYAYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVLAELMLGQPLFPGESGVDQLVEIIKVKYLIPF* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02222 295 SMART serkin_6 73 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g02222 295 CDD STKc_GSK3 68 289 IPR039192 -
Pte6g02222 295 FunFam Glycogen synthase kinase-3 beta 57 152 - -
Pte6g02222 295 Pfam Protein kinase domain 73 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g02222 295 ProSitePatterns Protein kinases ATP-binding region signature. 79 103 IPR017441 GO:0005524
Pte6g02222 295 MobiDBLite consensus disorder prediction 1 16 - -
Pte6g02222 295 FunFam Mitogen-activated protein kinase 155 291 - -
Pte6g02222 295 SUPERFAMILY Protein kinase-like (PK-like) 72 289 IPR011009 -
Pte6g02222 295 Gene3D Transferase(Phosphotransferase) domain 1 153 294 - -
Pte6g02222 295 ProSiteProfiles Protein kinase domain profile. 73 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g02222 295 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Pte6g02222 295 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 37 289 - -
Pte6g02222 295 Gene3D Phosphorylase Kinase; domain 1 57 152 - -
Pte6g02222 295 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02222 Pte-Chr6 37998730 38002196 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02222 73 283 MAP Kinase Gene Family AT2G42880 39.910 4.21e-46 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Pte6g02222 Pkinase 1e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02222 K27413 - vvi:100258056 549.28