Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02221 ATGGCTGGTGATCTCAAAGCTGCATTGTCCAAGAAAACTACCATATTTGGTTTTAAGGTCTGGGAAGTAATTGGGATTGTAGCAGCATTATTTGTTGTCATTATTCTTTTGATGCTCTCCCTGTGTCTTACTTCTCGCAAGAAATTGCGAAGAGCTAGTGAGAAGAATCCCCATGGTCAAATACCGGTTGTGTCAAAGGAAATTAAGGAAGTAAGCATTGATCAAGTGCCAACTAATGATTTTGTTGCTCGTGATGGAATACTTCTGACTGCAGATGATAAATCCAGTGACAAGGAATCAGATAGCATTATGATCCACCTGGGGGGTTCCATTAACCATCTAGACAAGGATCGGTCACAATCAGATGAAGCTGGTAGTTCCAATTCTGTCTCGGTGTATAAGCCATTTCCCACAGTTGCTCCTTCTCCTCTAGCTGGATTACCTGAGTTCTCTCGTTTGGATTGGGGCCACTGGTTTACATTGAGAGATCTTGAACTCGCTACAAACAGATTTTCAAAAGAGAACCTACTTGGCGAAGGTGGGTACGGAGTTGTATACCATGGAATGTTGATCAATGGGACTCCGGTTGCTGTGAAAACGATCCTCAACGACCTTGGTCAAGCGGAAAAGGAATTTAAGGCAGAAGTTGAAGCTATTGGCCATGTGAGGCATAAAAATTTGGTTCGACTTTTGGGATACTGCATTGAGGGTACTCACAGGATGTTAGTATACGAGTATGTTAACAATGGAAACTTAGAGCAATGGCTTCATGGAGCTATGCGCCATCATGGTTATCTAACCTGGGCAGCCCGCATGAAGATTCTCCTTGGCACAGCTAAAGCTCTTGCATATTTGCACGAAGGCATTGAACCAAAGGTGGTGCACCGTGATATTAAGTCAAGCAACATTCTAATCGATGATGATTTCAGTGCCAAGGTTTCTGATTTTGGCTTAGCCAAATTACTCGGTGCTGGAAAAAGTCACATCTCAACTCGGGTAATGGGTACCTTTGGATATGTGGCCCCTGAATATGCAAATAGTGGACTCCTAAATGAAAAGAGCGATGTCTATAGCTTTGGGGTTCTGCTCTTGGAAGCAATTACTGGAAGAGAACCAGTGGACTATGGTCGTGCTGCACATGAGGTAAATCTAGTCGATTGGCTGAAGATGATGGTGGGGAACAGACGATCAGAAGAAGTTTTAGATCCAAAAATTGAAGTAAGGCCAACAACGAAAGTTTTGAAACGGGCCCTCTTGACTGCTTTGAGATGTGTTGACCCTGATTCTAAGAAAAGGCCGAAGATGGGGCAAGTTGTACGAATGATGGAGTCGGAGGAATACCCCATGCTCACAGAGGTTAGTCTTTTGCACCTTTTATTAGATGTTCAATGTGTTTAG 1398 0.4335 MAGDLKAALSKKTTIFGFKVWEVIGIVAALFVVIILLMLSLCLTSRKKLRRASEKNPHGQIPVVSKEIKEVSIDQVPTNDFVARDGILLTADDKSSDKESDSIMIHLGGSINHLDKDRSQSDEAGSSNSVSVYKPFPTVAPSPLAGLPEFSRLDWGHWFTLRDLELATNRFSKENLLGEGGYGVVYHGMLINGTPVAVKTILNDLGQAEKEFKAEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYVNNGNLEQWLHGAMRHHGYLTWAARMKILLGTAKALAYLHEGIEPKVVHRDIKSSNILIDDDFSAKVSDFGLAKLLGAGKSHISTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGREPVDYGRAAHEVNLVDWLKMMVGNRRSEEVLDPKIEVRPTTKVLKRALLTALRCVDPDSKKRPKMGQVVRMMESEEYPMLTEVSLLHLLLDVQCV* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02221 465 Gene3D Phosphorylase Kinase; domain 1 151 246 - -
Pte6g02221 465 FunFam Putative receptor-like serine/threonine-protein kinase 247 455 - -
Pte6g02221 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 293 305 IPR008271 GO:0004672|GO:0006468
Pte6g02221 465 ProSitePatterns Protein kinases ATP-binding region signature. 177 199 IPR017441 GO:0005524
Pte6g02221 465 CDD STKc_IRAK 177 443 - -
Pte6g02221 465 Gene3D Transferase(Phosphotransferase) domain 1 247 453 - -
Pte6g02221 465 ProSiteProfiles Protein kinase domain profile. 171 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g02221 465 SMART serkin_6 171 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g02221 465 Pfam Protein kinase domain 172 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g02221 465 FunFam Putative receptor-like protein kinase 153 246 - -
Pte6g02221 465 SUPERFAMILY Protein kinase-like (PK-like) 154 449 IPR011009 -
Pte6g02221 465 PANTHER OS01G0323000 PROTEIN 5 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02221 Pte-Chr6 37990338 37993046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02221 17 445 Trihelix Transcription Factor Family AT1G70460 41.743 9.39e-92 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pte6g02221 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02221 - - qsa:O6P43_007383 741.495