Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02218 ATGGATGGAAGTGGGACGGGAACGCTGTACGCGGCGGCTCAGTACTCTTCGGCCAAGATATCTGTGTGGTGGGACATCGAGAACTGCCATGTCCCCAGAGGCTGCGATCCAAACGCTATTGCTCAGAACATTAGCTCTGCCCTGGCTAAGTTGAATTATTGTGGACCCGTCTCCATTTCTGCCTACGGCGATACCACTCGGATCGAGGCATCTGTCCAGCACGCCCTCTCAAGTACTGGTGTATCCCTCAACCATGTCCCTGCTGGTGTTAAAGATGCCAGCGATAAGAAGATTCTCGTTGACATGTTGTTCTGGGCTGTTGACAATCCTGCGCCTGCTAATTATTTACTAATCTCTGGTGATCGAGACTTCTCTAATGCTCTCCATCAGTTACGGATGAGAAGATACAATATTCTTTTAGCACAACCTCATACAGCATCTGCCCCACTTACTGCAGCTGCAAAAAGTGTATGGCTTTGGACGGATCTTTTTGCCGGAGGACCTCCCCTTACCGATGTCAAATCGCAACAAATTAATACTACTAGTCTTTTATCAAGTTCTGACTCCTTAATCACACCGTTTTCTGGTGCTTATCAAACAAATCAACACATAGGTTCCTATTCTGGGATTCAGCATAGGGGGAATAATAATTTTCTTAATGGTGGAAGGGGATTTGATCCAAGATCTCAAAATAACACGAATAGGAGAAACTCAAGTCAACCAAATGGATCTAGCACTCCAGGTCTTCCAGCTGGGTCTCAAGAAATTTTTAGCAGTACTGACTCTCATCATAGTGGTTCTTATCCGCCAAATCTTCCTACTAGTGGATATACTTCAAGCATTGTTCGTGGGAGCTCTAATCCTCCATGGAGCAATAATGACAATATAGACAATAATCATCGAGGTCAAATTTTAATACAGCCTGCTCCAGTACCAAGTAATTTGTACCGACCTTCACTTGTGCCTCCTAGGCCTACCGCACCCTACTCCACTTCAGGATCACTACCACCCATTGCTTTAATGGACAATTTAAAAGTTTCTGGGTATCAAAGCAATGTCCGTGCTCCTCATATTGTTCAACAATGGAATGATGAGTTAAAATCAAATCATGTCCACAAATCTCTAGGTTTTGCAAGGTCAAGCAATGAACAGAATAGCCATATGCCTCACAATGCCCCACTGCTCTATGCTTATGCTCAGGGTCCAGAACATCATCCACCTTCATCATCTGGAGCAATGTCTACCACTAACAGGATTGGTGTGTGGGGTTCTCTTGGGTGCCCCAAACCTTCTGAATATGTCCAAGGACTTATAGGTGTGGTTTTACTGGCACTGAATACTCTAAAAGCAGAAAAGATAATGCCCACTGAGGCAAATATAGCTGATTGCATTCGTTATGGAGACCCAAGGCATCGTAACACTGTTGTAAAGACAGCATTGGCGAGTGCCATTGAGCAGCAAATGGTGGTGAAACAAAATTTAGGTGCTCTGCAGTTATATGTTGGCAAGAATGAGAAACTTTGGAAATGTGTAAATCCTATTGGTGGTAATCCTAACCAATATCCAAAGGCTACATGGGATGAGATTCAAAACTTTCTAACTATTCCTATGGGAAGATCAGCTATAATGGCATCTCGTTGCAAGTATGAAGCTGGTACTATGATAAAAAACATGTGCTTAAAGCAACTTGCTTTGGGTGATGTACTTCAGCTATTAAATATGGTAATCAGCGTAAAGAAATGGATCGTGCACCATCAATCTGGATGGCAACCAGTTAGCATCAATCTTCCTGAGAGCAATGGTTTCTCCGAGGTCATTGCTGGTAGTGCATAA 1833 0.4354 MDGSGTGTLYAAAQYSSAKISVWWDIENCHVPRGCDPNAIAQNISSALAKLNYCGPVSISAYGDTTRIEASVQHALSSTGVSLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPHTASAPLTAAAKSVWLWTDLFAGGPPLTDVKSQQINTTSLLSSSDSLITPFSGAYQTNQHIGSYSGIQHRGNNNFLNGGRGFDPRSQNNTNRRNSSQPNGSSTPGLPAGSQEIFSSTDSHHSGSYPPNLPTSGYTSSIVRGSSNPPWSNNDNIDNNHRGQILIQPAPVPSNLYRPSLVPPRPTAPYSTSGSLPPIALMDNLKVSGYQSNVRAPHIVQQWNDELKSNHVHKSLGFARSSNEQNSHMPHNAPLLYAYAQGPEHHPPSSSGAMSTTNRIGVWGSLGCPKPSEYVQGLIGVVLLALNTLKAEKIMPTEANIADCIRYGDPRHRNTVVKTALASAIEQQMVVKQNLGALQLYVGKNEKLWKCVNPIGGNPNQYPKATWDEIQNFLTIPMGRSAIMASRCKYEAGTMIKNMCLKQLALGDVLQLLNMVISVKKWIVHHQSGWQPVSINLPESNGFSEVIAGSA* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02218 610 Gene3D - 11 163 - -
Pte6g02218 610 Pfam NYN domain 19 155 IPR021139 GO:0004540
Pte6g02218 610 CDD PIN_limkain_b1_N_like 19 143 - -
Pte6g02218 610 PANTHER LIMKAIN B LKAP 15 491 IPR024768 GO:0005777|GO:0010468
Pte6g02218 610 MobiDBLite consensus disorder prediction 208 300 - -
Pte6g02218 610 Pfam OST-HTH Associated domain 545 607 IPR025677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02218 Pte-Chr6 37973331 37977513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02218 11 246 C2H2 Transcription Factor Family AT5G61190 60.084 5.94e-80 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02218 - - qsa:O6P43_007380 754.592