Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02217 ATGAGTGTAAAGACGATAGATGAGTATACAGAGGAAAAGGACAAGAAGAAAAGGAGGCAATTGGTTACCAACATAATTCTATTGGCTCTCTCTGTATTGATAATTGGAGCAGTGACCATTGCTGTTGAGACAGGAATGTTTGGTAAGAGCGACGATGGCCAAGGTTCAACTCGTGATGTTCAATCAGTCTGCAAGGAAACCGATTTCCCTAATGAATGTTATCAGAAACTCAAGTACGTAGGCCAAAGAGCCATGACAATAAAGTACGTGAAAGCTGGCCTGGATAAAACTCTGGAAGAAATGCAACCCGCAATGGAAACTGAAAATAAAGACCTTGATCACTTGCAGCCAGATCAGGTCGATGTCCTTGGCGATTGCCTACAGCTGATCAGTACAGCTGCGGAAGGACTCCGAGAAATGATCAAATGGGTAGAGTCTGACAAGAAGTTCTTGCAGTCAAATCCAGAGGAACTTAGGACAGGCTTGAGTGCTGTTATCTCGTCCACACAAATTTGTCTTGATGAGTTAGAGCTGATGAATAGCACCAGTGTCTATGATGATGGGAACTCCTTAAGAACTCCATTGCAGACGGCAAGGATTACCTTAGCCATCGTCTACTATAATTCTGATAACAATGATAAAAAGGCATATACACATGAACGATCAAGTAACCGAAAATCCTTAATGACGAAATACACTGCTACCAATTCTGATAATGACAATGGTAAAGCTTTCCCAACATGGATGACAGGAGCGGACAGGAAACTCTTGGAGGCTCATGAAAATGGCAATCTCAAGCCAGATGTTGTAGTGGCCAAAGATGGAAGTGGACATTATAGAAGTATAGGGGAAGCCATTGACGAATATCCATTGGAACGCAATACTCGATATGTCATCTATGTCCGCGAAGGAATATACTCAGAGAGAGTATTCATTGACAGCAGTGTCACGCAAATATTCATGTATGGCGACGGGCCTAACAATACCATTGTGTCTGGATATTTTGACGAGAATTCAGTAATCACAGCCTTCATGGGGTCTACACTTGTTGTGTTTGGGCATGGCTTCCTCTGCAAGGATTTGACTATTGCTGCTGTGGATGGCCCTTTTCAATATGAATACTCACCAGCAGTCCGTGTCCATGCTGATAAATCAGCATTCTTCAATACCGTAATAAGAGGTGATAGAGGTGGCTTGTTTGCTGGAGCTCATCGTCAATTCTACAGAGACTGCGAGATTCTTGGGGGTGGACCTGTCCTCAAGGGTGATGCTGCAGCAGTGATACAGAACTCCCAAATCCTTTTGAATCCTACCAAAACCACGAATGTAGTAAGTGAACATTTGAGGTCAGACAAGAATGAGAACACCGGATTTGTGATCCATAACTGCAGCATCGGCATCAATAGCGAGTACGACGAAACACCGTCCAGGAAGACTTACAAGAATCCCCTGTATGCGAGTTGTCTAGGTAGACCAGGGAAAGAATTCTCAAGAACAGTGATAATGGAATCTTATCTACCAGATATTATAAAGCCACAGGGATGGTGTCAACTTAGGGATGACTACGGTGTGGAAAATGCAACATTCCTTGAGTACAACAACAATGGAAATGGAGCTAAGACTGACAAGAGGATAAATTGGTCCAGTTTCGGCATCATCGAAGATGTAGAAGAAGCTCGAAGATATACACCTGGTCGGTTCATCAACGCGGATAATTGGCTCAAGAGCTCAGGCATACCATACTTCTCTGGGCTTGTATCAGATGGGGGTAGTGCTTGA 1779 0.4351 MSVKTIDEYTEEKDKKKRRQLVTNIILLALSVLIIGAVTIAVETGMFGKSDDGQGSTRDVQSVCKETDFPNECYQKLKYVGQRAMTIKYVKAGLDKTLEEMQPAMETENKDLDHLQPDQVDVLGDCLQLISTAAEGLREMIKWVESDKKFLQSNPEELRTGLSAVISSTQICLDELELMNSTSVYDDGNSLRTPLQTARITLAIVYYNSDNNDKKAYTHERSSNRKSLMTKYTATNSDNDNGKAFPTWMTGADRKLLEAHENGNLKPDVVVAKDGSGHYRSIGEAIDEYPLERNTRYVIYVREGIYSERVFIDSSVTQIFMYGDGPNNTIVSGYFDENSVITAFMGSTLVVFGHGFLCKDLTIAAVDGPFQYEYSPAVRVHADKSAFFNTVIRGDRGGLFAGAHRQFYRDCEILGGGPVLKGDAAAVIQNSQILLNPTKTTNVVSEHLRSDKNENTGFVIHNCSIGINSEYDETPSRKTYKNPLYASCLGRPGKEFSRTVIMESYLPDIIKPQGWCQLRDDYGVENATFLEYNNNGNGAKTDKRINWSSFGIIEDVEEARRYTPGRFINADNWLKSSGIPYFSGLVSDGGSA* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02217 592 CDD PMEI-like_3 62 205 - -
Pte6g02217 592 Gene3D - 265 587 IPR012334 -
Pte6g02217 592 Pfam Pectinesterase 268 571 IPR000070 GO:0030599|GO:0042545
Pte6g02217 592 Pfam Plant invertase/pectin methylesterase inhibitor 60 178 IPR006501 GO:0004857
Pte6g02217 592 SUPERFAMILY Pectin lyase-like 266 584 IPR011050 -
Pte6g02217 592 PANTHER PECTINESTERASE 30 575 - -
Pte6g02217 592 Gene3D Invertase/pectin methylesterase inhibitor family protein 56 207 IPR035513 -
Pte6g02217 592 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 180 IPR035513 -
Pte6g02217 592 SMART PMEI_2 55 204 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02217 Pte-Chr6 37970300 37972425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02217 11 592 Carbohydrate Esterase AT3G05610 31.448 7.78e-88 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02217 K01051 - gmx:102665007 383.259