Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02215 ATGGCGATCAGACACAGACCAACGCAGAAACAAAAGCAGAAGGGAGAGGTGGGAGACTGTAGATCCGGAAAATTTAAGATGGACTGCGGGTGGTACAACGGCAGGCAGGAAAAAAGTAGCCGGGTTAAGCTGATACATGAAAATGATCAAGATTCTCTTATCGACGAGATGGCGGAGGATTTTCGTTTGCCCATCAACCAGAGGCCAACTGAAAATGTTGATCTGGACAACGTGGAACAAGCATCATTAGACACACAATTAACGTCATCCAATATTGGTTTTAGGCTTCTCCAAAAGATGGGTTGGAAGGGCAAGGGTCTCGGGAAAGATGAGCAAGGAATCATTGAACCGATAAAATCCGGGATCAGGGATCCAAAATTAGGTATTGGGAAACAAGAGGAAGATGATTTTTTTACTGCTGAAGAAAACATACAAAGGAAAAAGCTTGATGTAGAGGTGGAGGAGACTGAGGAGCTTGCTAAGAAGCGGGAGGTCTTGGCAGAACGTGAGCAGAAAATTCAAACTGAGGTGAAACAAATACGAAAGGTGTTTTATTGCGACCTCTGCCACAAGCAATACAAATTGGCAATGGAATTTGAAGCTCATCTTAGCTCATATGACCATAATCACAGAAAGCGGTTTAAAGAAATGAAGGAAATGCATGGTACTAGTGGTCGGGATGATCGGGAGAAACGGGAACAGCAACGCCGAGAAAAAGAGATGGCCAAGTTTGCCCAAATGGCTGATGCTCGAAAGCAGCAGCACATGCAACAGAAACTGGACGAGTCTGCAGGCGCTTCAGTTTCCTCTGAATCCAAAGTTGCTACAGCCCTTGCAGATCAGGAGCAGCGCAGGGTTTTGAAGTTTGGGTTTTCTTCCAAAGGCAGCAACACCAAGATCTCGTTCGGCAGTGCTGTGAAGAAACCAAAAGTGGCAGCTGCCTCTGTCTTCGGAGATGTTAGTGATGAAGAGTAG 975 0.4564 MAIRHRPTQKQKQKGEVGDCRSGKFKMDCGWYNGRQEKSSRVKLIHENDQDSLIDEMAEDFRLPINQRPTENVDLDNVEQASLDTQLTSSNIGFRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRKKLDVEVEETEELAKKREVLAEREQKIQTEVKQIRKVFYCDLCHKQYKLAMEFEAHLSSYDHNHRKRFKEMKEMHGTSGRDDREKREQQRREKEMAKFAQMADARKQQHMQQKLDESAGASVSSESKVATALADQEQRRVLKFGFSSKGSNTKISFGSAVKKPKVAAASVFGDVSDEE* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02215 324 MobiDBLite consensus disorder prediction 1 21 - -
Pte6g02215 324 ProSiteProfiles G-patch domain profile. 89 134 IPR000467 GO:0003676
Pte6g02215 324 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 27 324 - -
Pte6g02215 324 Pfam G-patch domain 90 130 IPR000467 GO:0003676
Pte6g02215 324 MobiDBLite consensus disorder prediction 259 277 - -
Pte6g02215 324 MobiDBLite consensus disorder prediction 252 277 - -
Pte6g02215 324 SMART G-patch_5 87 132 IPR000467 GO:0003676
Pte6g02215 324 MobiDBLite consensus disorder prediction 218 238 - -
Pte6g02215 324 ProSitePatterns Zinc finger C2H2 type domain signature. 186 208 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02215 Pte-Chr6 37959368 37962462 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02215 27 325 C2H2 Transcription Factor Family AT5G26610 68.197 1.26e-128 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02215 - - jre:108987907 456.447