Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02211 ATGTCAAGCACCACCGCATTGACCCACGCTTCGAGCTCTTGGGCTCGTGCTCTCATCATGATTTCTCCTTATACATTCTCTGCCATCGAAATCGCTATCGCCATTGGCGTTTCTGTCCTTGGCGCCGCCTGGGGGATTTATATAACGGGAAGTAGTTTGATTGGTGCTGCAATCAAAGCTCCAAGAATCACTTCCAAGAATTTGATCAGTGTGATCTTTTGTGAAGCTGTTGCTATCTATGGTGTTATAGTGGCCATTATTCTACAAACGAAGTTGGAAAGCGTTCCAGTAGCTAACATCTTTGCACCTGAGTCTCTTAGAGCCGGATATGCAATATTTGCCTCTGGAATTATTGTAGGTTTTGCAAATCTTGTCTGTGGGTACGAAACCTTTGCCTTCGTTTATCTTGATGTCAAAGGTTGTGCATTGTCTGATGCGCAGAACTCGTCACTCTTTGTGAAGATTCTTGTCATCGAGATCTTTGGCAGTGCGCTTGGGTTTTTCGGAGTAATTGTTGGAATCATCATGTCTGCTCAAGCTACATGGCCTTCGAAAATTTGA 561 0.4421 MSSTTALTHASSSWARALIMISPYTFSAIEIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPVANIFAPESLRAGYAIFASGIIVGFANLVCGYETFAFVYLDVKGCALSDAQNSSLFVKILVIEIFGSALGFFGVIVGIIMSAQATWPSKI* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02211 186 CDD ATP-synt_Vo_c_ATP6F_rpt1 26 88 - -
Pte6g02211 186 Gene3D - 24 182 IPR035921 -
Pte6g02211 186 PRINTS Vacuolar ATP synthase 16kDa subunit signature 155 178 IPR000245 GO:0033179|GO:0046961|GO:1902600
Pte6g02211 186 PRINTS Vacuolar ATP synthase 16kDa subunit signature 42 66 IPR000245 GO:0033179|GO:0046961|GO:1902600
Pte6g02211 186 SUPERFAMILY F1F0 ATP synthase subunit C 105 177 IPR035921 -
Pte6g02211 186 CDD ATP-synt_Vo_c_ATP6F_rpt2 108 176 - -
Pte6g02211 186 FunFam V-type proton ATPase proteolipid subunit 24 183 - -
Pte6g02211 186 SUPERFAMILY F1F0 ATP synthase subunit C 21 91 IPR035921 -
Pte6g02211 186 Pfam ATP synthase subunit C 31 88 IPR002379 GO:0015078|GO:0033177|GO:1902600
Pte6g02211 186 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 10 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02211 Pte-Chr6 37925835 37927757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02211 1 185 Primary Pumps ATPases(2) AT4G32530 72.512 1.09e-94 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02211 K03661 - zju:107421253 281.952