Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02210 ATGGTGAAGATTTTGTGCCTTGGCGTTGCTGTAGCACTTGTTTACGCCACTTTTGTTAATGGCTTTGCAGAGTTTAACTTCAATGAAACAGAAATGTCATGGTTTGATTCTGACCAAGCATCGGCTGTTGTCCGCAATCCCCTAGTAGTGGGATTGACTCTCATTCAAATTGCTGGTGCCAAAGGAGCAGTTTGCTTGGATGGAACATTACCCGGGTATCATTTTCATCCTGGATATGGAGCAGGAGCAAATAGCTGGCTTATACAATTGGAGGGAGGTGGATGGTGTAATAACATTAGAAGTTGCGTCTACCGCAAAACCACAAGGCGTGGATCATCAAAATTTATGGAAAAGCAGTTAATATTTACAGGAATATTAAGCAATAAGGCTGAAGAAAATCCAGATTTTTATAACTGGAACAGGGTAAAGCTTCATTATTACGATGGAGCCTCATTAACTAGAGATGGTGAAAATCAGGCTGGGATGGATGAGTTGATGTCAAAGGGAATGCGCTTTGCTAAGCAGGCTCTTCTTTTTGGATGCTCTGTTGGGGGTCTCGCCTCTATTCTACACTGTGATGAATTCCGTGACCTTTTTCCTAGGACTACAAAAGTGAAGTGCCTCAGTGATGCTGGGTTGTTCCTCGATGCCTACTACACATGGGGTTTGTCCCTATTAATCGTTCCCATGCTTGATTCTTGTACGGTTGATGTATCCGGTGGGCGTACCCTTAGAAACTTTTACAGTGGGATTGTGGGGTTGCAGGATTTGCAGAAGAATCTGCCACGTACCTGTACCAGCCACATAGACCCTACTTCGTGCTTCTTCCCCCAGAACTTGATTGCAGATGTTCGTACCCCATTGTTTGTTCTCAATGCAGCATATGATGCATGGCAGTTACAATCCAGCTTAGCTCCACCATCAGCAGATCCCCATGGTTATTGGCACGATTGCCGTTTAAATTACCTGAAATGTTCTACATCACAAATCCAATTTATGCAAGGATTTAGAAATCAAATGCTAAAAGTAATTAAGGTTTTCTCAGCTTCCATTCAAAATGGATTATTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAGAGGCAGGATACATGGTATGCTGACAATTCTCCTACCATTCGGAACAAGCCAATTGCTATAGCTGTTGGAGATTGGTTTTTTTATAGAGCAAGCACCAAATTTATTGATTGTGCGTACCCTTGCGATGATACATGCCATAACCTGATCTTCAATTGA 1257 0.4224 MVKILCLGVAVALVYATFVNGFAEFNFNETEMSWFDSDQASAVVRNPLVVGLTLIQIAGAKGAVCLDGTLPGYHFHPGYGAGANSWLIQLEGGGWCNNIRSCVYRKTTRRGSSKFMEKQLIFTGILSNKAEENPDFYNWNRVKLHYYDGASLTRDGENQAGMDELMSKGMRFAKQALLFGCSVGGLASILHCDEFRDLFPRTTKVKCLSDAGLFLDAYYTWGLSLLIVPMLDSCTVDVSGGRTLRNFYSGIVGLQDLQKNLPRTCTSHIDPTSCFFPQNLIADVRTPLFVLNAAYDAWQLQSSLAPPSADPHGYWHDCRLNYLKCSTSQIQFMQGFRNQMLKVIKVFSASIQNGLFINSCFAHCQSERQDTWYADNSPTIRNKPIAIAVGDWFFYRASTKFIDCAYPCDDTCHNLIFN* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02210 418 PANTHER NOTUM-RELATED 46 414 IPR004963 GO:0016787
Pte6g02210 418 Pfam Pectinacetylesterase 46 218 IPR004963 GO:0016787
Pte6g02210 418 Pfam Pectinacetylesterase 236 397 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02210 Pte-Chr6 37920366 37923958 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02210 13 417 Carbohydrate Esterase AT1G57590 59.579 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02210 K19882 - qsa:O6P43_007364 633.254