Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02204 ATGTTGCAGCTCAAGGACTTGATATTCCCAACTTTGACCTGGTTATCCACTGAACTTCCCAATGATCCGGAGACATTTGTACATCGCTCTGGCCGTACTGGACGTGCTGGGAAAGAAGGTACTGCTCTTCTAATGTACACCAGCAGCCAGGCGAGAATTGTGAGATCTCTTGAACGAGATGTAGGTTACAGGTTTGAGTTCATTAGTCCACCAGCTGTAGAAGAGGTTTTGGAGTCATCTGCTGAGGAAGCAGTTGCTACTCTTAATGGAGTTCACCCTGAATCTATAGAGTTTTTCACTCCAAGTGCACAAAAATTGATTCAAGATCAAGGAGCAACTGCACTTGCTGCTGCATTAGCACATCTGGCTGGATTCTCTCGACCACCTTCTTCCTGA 396 0.4596 MLQLKDLIFPTLTWLSTELPNDPETFVHRSGRTGRAGKEGTALLMYTSSQARIVRSLERDVGYRFEFISPPAVEEVLESSAEEAVATLNGVHPESIEFFTPSAQKLIQDQGATALAAALAHLAGFSRPPSS* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02204 131 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 17 120 - -
Pte6g02204 131 Gene3D - 13 120 IPR027417 -
Pte6g02204 131 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 81 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02204 Pte-Chr6 37899806 37900412 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02204 15 59 Eukaryotic Initiation Factors Gene Family AT1G72730 37.778 1.19e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02204 - - mesc:110622432 188.734