Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02191 ATGGGGACAGAGAATGGCGTGGGCAGTGATACGCCGACAACCTCAGAGAAACAAGCGTTAACAAGCAAAGAAAATGAAAAGACAAACTCCGTTCCATTTCACAGGCTGTTCTCTTTTGCAGATTCTACTGACGCTATGTTGATGATTGTGGGCAGCGTCGGAGCCATTGGGAATGGTTTGGGTCTACCCCTCATGACTTTACTATTTGGTCAAATGATCGATTCTTTTGGAGGTAATCAGGTCAACAGTGATATTGTCAAAGTGGTTTCTAAGGTGTCTCTGAAATTTGTTTACTTGGCGGTGGGAATTGGAGTAGCAGCATTCCTCCAGGTGACTTGCTGGATGGTCACAGGGGAGAGGCAGGCTGCTAGAATAAGAGGTTTGTATTTGAAAACAATACTGAGGCAAGATGTTAGTTTCTTTGATAAGGAAACAAATACTGGGGAGGTGGTTGGGAGAATGTCAGGAGATACTGTTCTGATACAAGATGCCATGGGCGAGAAGGTTGGGAAATTTTTGCAGCTGATATCAACATTCTTCGGTGGCTTTGTCATAGCATTTGTCAAAGGGTGGCTTCTCACTCTTGTCTTACTGTCCTCTCTTCCTCTTCTTGCAATCTCTGGTGCAGCTATAGCTATAATCATTGGCAAAATGGCATCTCGGGGTCAAACTGCTTATGCAAAAGCTGCAAATGTTGTTGAACAGACAATAGGCTCAATTAGAACAGTCGCATCCTTCACTGGAGAGAAGCAAGCTATATCTAACTACAGCAAGTATCTTGTGGATGCTTACAAATCAGGAGTTCATGAAGGCTTTGCAGCTGGACTTGGTCTTGGAACAGTGATGTTTGTTGTTTTCTGCACCTACTCTTTGGCTGTATGGTTTGGAGCAAAGATGGTACGAGAAAAGGGATATACCGGTGGTATGGTCATTAATGTGATCGTCGCTGTGTTAACTGCTTCTATGTCACTTGGTCAGGCATCTCCTTGCATGAGTGCATTTGCTGCTGGTCAATCTGCAGCATACAAGATGTTTGAAACTATAAAGAGGAAGCCAGAGATAGATGCTTATGATACAAAGGGGAAAGTATTAGAGGATATCCGTGGTGAGATAGAGTTAAAAGATGTCTATTTCAGCTATCCAGCCAGGCCACATGAGCAAATATTCAATGGATTCTCTCTGTCCATACCCAGTGGAACCACTGTAGCTTTAGTTGGACAAAGCGGAAGTGGAAAGTCAACAGTAATTAGCCTGATTGAAAGATTTTATGATCCTCACTCGGGCGAAGTTCTTATTGATGGCATTAATCTCAAAGAATATCAGCTTAAATGGATCAGGGGAAAAATTGGCCTTGTCAGCCAGGAGCCTGTGCTATTTGCATCAAGCATTAGGGACAACATCGCTTACGGAAAAGATGGAGCAACTCGGGAAGAAATAAGAGCAGCCACTGAGCTAGCAAATGCTTCCAAATTTATTGATAAACTGCCGCAGGGATTGGACACAATGGTTGGTGAGCATGGAACCCAGTTATCGGGTGGACAGAAGCAGCGAATTGCCATTGCAAGAGCGATACTGAAAGACCCTAGAATACTACTGCTGGATGAAGCTACAAGTGCACTGGACGCAGAGTCTGAAAGGATAGTGCAAGAGGCATTGGACAGGATTATGGTCAATCGAACTACTGTGATTGTGGCTCATCGTTTGAGCACTGTGAGAAATGCTGACACGATTGCAGTTATCCACAGAGGGAAGATGGTTGAGAAAGGCTCACACACTGAATTACTCGAGAATCCTGACGGTGCTTACTCTCAGCTTGTGCGCTTACAAGAAACAAGTAACCAAGAGGAAGCTGCAGATGAACTGAACAAAGCTGAAGGTTCTATAGAATCACTTAGGCAATCAAGCCAAAGAATTTCGCTGCAAAAATCCATAAGTAGAGGATCATCAATAGGAAACAGCAGCCGTCATTCGTTTTCAGTTGCATTTGGGTTACCCACGGGGGTCAATGTCGCTGATCCTGAACTTGCAGCTCCCGAACCTGAAAAAGCTCCATCAGTCCCAATGCGCCGCCTTGCCTACTTAAACAAACCCGAGATTCCAGTTTTACTGATTGGATCCCTTGCTGCTATCATTAATGGCGTGATACTTCCAATCTTCGGAATACTTATTTCCAAAGTAATCAAAACTTTTTATGAGCCACCTCATGAAATGAAGGAGGATGCTAGGTTTTGGGCATTGATGTTTGTTGGCCTCGGTATCGTATCATTTCTGGTGATTCCTGCTCGAGGATACTTCTTCTCTGTAGCAGGGTGTAAATTAATTCAGCGTATCAGATTGATGTGTTTTGAGAAGGTGGTGCGTATGGAGGTTGGTTGGTTTGATCATTCAGAGCACTCAAGTGGTATGATTGGTGCCAGGCTTTCAGCTGATGCTGCAACTGTGCGCGCTCTGGTTGGTGATGCTCTCGGACTTATAGTTCAAAACATAGCAACAGCGCTTGCTGGTTTGCTCATTGCTTTCATTGCAAGTTGGGAGTTGGCATTTATCATTCTTGTTTTGATTCCCCTTATTGGATTGAATGGATATGTTCAAATGAAATTCATGAAAGGATTCAGTGCCGATGCTAAGATGATGTACGAGGAAGCAAGTCAAGTGGCTAATGATGCAGTAGGAAGTATTAGAACAGTCGCTTCATTCTGTGCGGAAGACAAGGTGATGGAACTCTACCAAAAGAAATGTGAAGGCCCCATGAACTCGGGGATAAGACAAGGGTTGATCAGTGGAATTGGTTTTGGAGTATCATTCTTCTTGCTCTTTTGTGTATATGCAACCAGTTTCTATGCAGGAGCAAGGCTTGTTGACGCTGGCAAAACAACATTTCCAAAAGTATTTCAAGTGTTTTTTGCTTTGACAATGGCAGCTGTGGGAATGTCCCAATCTAGCTCCTTGGCTCCCGATTCTAGTAAAGCCAAGTCAGCTACTGCTTCCATATTTGGAATAATAGATCGAAAGTCAGAGATTGATCCCAGTGACGAGTCTGGGACTACGTTAGACAATGTAAGAGGCGAGATTGATCTTCGCCATGTAAGTTTCAAGTATCCTTCCAGACCAGACATCCAGATTTTCCGGGACCTCAGCTTGGCAATTCATGCTGGGAAGGTAAATTCCATGATAAGCTCCGATTTGCTTGGCTTTTTAATTCTTCTTACAGATATAATGGTGTACAATTTCATGTTTCAGACAGTGGCCCTTGTTGGAGAAAGTGGAAGTGGCAAATCCACCGTGATTGCTTTGTTACAAAGATTCTACGACCCTGATTCAGGTCATATTACTCTAGATGGAGTAGAAATTCAACAGTTCCAATTGAAGTGGTTGAGGCAACAGATGGGTCTTGTTAGTCAAGAACCAGTTTTGTTTAATGACACCATCCGGGCAAACATTGCATATGGCAAGGGAGGCAATGCAACTGAGGCAGAGATTATAGCTGCAGCAGAGTCAGCAAATGCTCACAAATTCATCAGTAGCTTGCAACAGGGATATGAAACTGTAGTAGGAGAGCGTGGAATACAATTATCAGGTGGGCAGAAACAACGTGTAGCCATAGCACGTGCCATAATTAAAAGTCCAAAGATACTGCTGTTAGATGAAGCAACCAGTGCATTGGATGCAGAGTCAGAAAGGGTTGTTCAAGATGCATTAGATAGAGTGATGGTTAACCGGACAACAGTCGTGGTAGCTCATCGCTTGTCCACCATCAAGAACGCTGATTTGATTGCTGTGGTTAAAAATGGTGTCATAGTAGAAAAGGGGAAGCATGAGAGCTTGATTCACATCAAGGATGGATTTTATGCTTCCTTAGTCGCACTTCATACAACCTCTTCAACTGTATAA 3891 0.4354 MGTENGVGSDTPTTSEKQALTSKENEKTNSVPFHRLFSFADSTDAMLMIVGSVGAIGNGLGLPLMTLLFGQMIDSFGGNQVNSDIVKVVSKVSLKFVYLAVGIGVAAFLQVTCWMVTGERQAARIRGLYLKTILRQDVSFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLISTFFGGFVIAFVKGWLLTLVLLSSLPLLAISGAAIAIIIGKMASRGQTAYAKAANVVEQTIGSIRTVASFTGEKQAISNYSKYLVDAYKSGVHEGFAAGLGLGTVMFVVFCTYSLAVWFGAKMVREKGYTGGMVINVIVAVLTASMSLGQASPCMSAFAAGQSAAYKMFETIKRKPEIDAYDTKGKVLEDIRGEIELKDVYFSYPARPHEQIFNGFSLSIPSGTTVALVGQSGSGKSTVISLIERFYDPHSGEVLIDGINLKEYQLKWIRGKIGLVSQEPVLFASSIRDNIAYGKDGATREEIRAATELANASKFIDKLPQGLDTMVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERIVQEALDRIMVNRTTVIVAHRLSTVRNADTIAVIHRGKMVEKGSHTELLENPDGAYSQLVRLQETSNQEEAADELNKAEGSIESLRQSSQRISLQKSISRGSSIGNSSRHSFSVAFGLPTGVNVADPELAAPEPEKAPSVPMRRLAYLNKPEIPVLLIGSLAAIINGVILPIFGILISKVIKTFYEPPHEMKEDARFWALMFVGLGIVSFLVIPARGYFFSVAGCKLIQRIRLMCFEKVVRMEVGWFDHSEHSSGMIGARLSADAATVRALVGDALGLIVQNIATALAGLLIAFIASWELAFIILVLIPLIGLNGYVQMKFMKGFSADAKMMYEEASQVANDAVGSIRTVASFCAEDKVMELYQKKCEGPMNSGIRQGLISGIGFGVSFFLLFCVYATSFYAGARLVDAGKTTFPKVFQVFFALTMAAVGMSQSSSLAPDSSKAKSATASIFGIIDRKSEIDPSDESGTTLDNVRGEIDLRHVSFKYPSRPDIQIFRDLSLAIHAGKVNSMISSDLLGFLILLTDIMVYNFMFQTVALVGESGSGKSTVIALLQRFYDPDSGHITLDGVEIQQFQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGNATEAEIIAAAESANAHKFISSLQQGYETVVGERGIQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLSTIKNADLIAVVKNGVIVEKGKHESLIHIKDGFYASLVALHTTSSTV* 1297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02191 1296 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 362 609 IPR027417 -
Pte6g02191 1296 Gene3D - 1080 1293 IPR027417 -
Pte6g02191 1296 Gene3D - 369 622 IPR027417 -
Pte6g02191 1296 Pfam ABC transporter 390 538 IPR003439 GO:0005524
Pte6g02191 1296 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1024 1288 IPR003439 GO:0005524
Pte6g02191 1296 SMART AAA_5 398 584 IPR003593 GO:0016887
Pte6g02191 1296 SMART AAA_5 1078 1271 IPR003593 GO:0016887
Pte6g02191 1296 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1014 1288 IPR027417 -
Pte6g02191 1296 ProSitePatterns ABC transporters family signature. 510 524 IPR017871 GO:0005524|GO:0016887
Pte6g02191 1296 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 49 336 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte6g02191 1296 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 703 989 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte6g02191 1296 Pfam ABC transporter transmembrane region 702 974 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte6g02191 1296 Pfam ABC transporter transmembrane region 49 322 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte6g02191 1296 CDD ABC_MTABC3_MDL1_MDL2 1024 1287 - -
Pte6g02191 1296 Pfam ABC transporter 1079 1219 IPR003439 GO:0005524
Pte6g02191 1296 Coils Coil 614 634 - -
Pte6g02191 1296 FunFam ABC transporter B family member 1 1066 1291 - -
Pte6g02191 1296 ProSitePatterns ABC transporters family signature. 1191 1205 IPR017871 GO:0005524|GO:0016887
Pte6g02191 1296 FunFam ABC transporter B family member 1 361 610 - -
Pte6g02191 1296 FunFam ABC transporter B family member 1 682 990 - -
Pte6g02191 1296 MobiDBLite consensus disorder prediction 1 27 - -
Pte6g02191 1296 SUPERFAMILY ABC transporter transmembrane region 684 1009 IPR036640 GO:0005524|GO:0016020
Pte6g02191 1296 PANTHER ABC TRANSPORTER B FAMILY 15 611 IPR039421 -
Pte6g02191 1296 FunFam ABC transporter B family member 9 991 1013 - -
Pte6g02191 1296 FunFam ABC transporter B family member 9 35 367 - -
Pte6g02191 1296 CDD ABC_MTABC3_MDL1_MDL2 371 609 - -
Pte6g02191 1296 CDD ABC_6TM_Pgp_ABCB1_D2_like 692 1007 - -
Pte6g02191 1296 CDD ABC_6TM_Pgp_ABCB1_D1_like 48 344 - -
Pte6g02191 1296 Gene3D ABC transporter type 1, transmembrane domain 94 998 IPR036640 GO:0005524|GO:0016020
Pte6g02191 1296 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 371 607 IPR003439 GO:0005524
Pte6g02191 1296 SUPERFAMILY ABC transporter transmembrane region 34 355 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02191 Pte-Chr6 37795498 37801358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02191 15 615 Calmodulin-binding Proteins AT2G36910 38.158 2.75e-118 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02191 K05658 - qsa:O6P43_010926 1991.85