Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02185 ATGGAGACTCGTGCAGCCAAGAGGAAGGCCGAGGAAGCAGCTGCTGCTGCCGCTCTCTTGCCCCAGAAACAGCCTCTCAAGAAGAAGCGAGTCGTCTTGGGTGACCTCCCTCATCTGTCGAACATCCTCCATCCAGAGGTTTTGGCTTCTGGGTTGATTCAACTCAAACCCAAATCTGAAGCCAGACTTAAGTCCAAGAAATCAATAGTGAAAGCCAAGATAACAATGGTAGCAGAGAAATTCAACGAAAATGGGAAGGTGGAAGATCCGAGGTTTTGCGCTGCTTACTCTTCAGACGTTGACGATTATCTTCGGCAACTGGAAATGGAGGTTAAGAGGAGACCTTTGTCTAATTACTTAGACAAAGTTCAGCAGGACATGACTCCTAATATGAGAGGAATGCTGGTAGATTGGTTGGTGGAGGTTGCGCAAGAGTACAGGCTTCTATCAGAGACCCTCTTTCTCTCTGTTTCTTACATCGACAGGTACTTATCATCGCATGTTGTCCACAGGCAAAGGCTTCAATTACTTGGTGTTTCCACCATGCTTATTGCCTCCAAATACGAAGAAGTCAAGCCCCCAGGTGTGGAAAAGTTCTGCGACATTACAGCTAACACTTACACTCAAGATCAAGTGGTGAAAATGGAAGCTGACATTCTCAAGTCTTTGAAGTTCGAATTGGGTACACCTACTGTAATCTCATTTCTGCAGAGATTTTCCGTGGTTGCTCTTGAAAACCAGAAAGGTCCCATTTTGCAGTTTGAATTTCTGAGTCATTACCTCTCCGAGTTGAGCTTGTTAGAATTTGCTTGCATCCAATTTTTGCCTTCTCTCGTTGCTGCGTCTGTTATATTTCTCGCCAGATTTACCATGTGGCCCAAGAGGGAACCTTGGAGTACAAAGTTAAAGGAATGCACAGGTTATCAATCTGCAGACCTGAAGGAATGCGTGCTTGTCTTGCACGATCTTTATCTGGGTAGGAGAGGAGGATCCTTTCAAGCTGTAAGAGACAAATACAAACAGCACAAGTTTAAATTCGTAGCCCTCCTGCCGTCTCCTCCAGAGGTTCCCCTTTCTTTCTTCGGAGGGCAGTAA 1095 0.4557 METRAAKRKAEEAAAAAALLPQKQPLKKKRVVLGDLPHLSNILHPEVLASGLIQLKPKSEARLKSKKSIVKAKITMVAEKFNENGKVEDPRFCAAYSSDVDDYLRQLEMEVKRRPLSNYLDKVQQDMTPNMRGMLVDWLVEVAQEYRLLSETLFLSVSYIDRYLSSHVVHRQRLQLLGVSTMLIASKYEEVKPPGVEKFCDITANTYTQDQVVKMEADILKSLKFELGTPTVISFLQRFSVVALENQKGPILQFEFLSHYLSELSLLEFACIQFLPSLVAASVIFLARFTMWPKREPWSTKLKECTGYQSADLKECVLVLHDLYLGRRGGSFQAVRDKYKQHKFKFVALLPSPPEVPLSFFGGQ* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02185 364 PANTHER CYCLINS 67 341 IPR039361 -
Pte6g02185 364 ProSitePatterns Cyclins signature. 132 163 IPR006671 -
Pte6g02185 364 Pfam Cyclin, C-terminal domain 230 352 IPR004367 -
Pte6g02185 364 Gene3D - 113 228 - -
Pte6g02185 364 SMART cyclin_7 137 221 IPR013763 -
Pte6g02185 364 SMART cyclin_7 234 322 IPR013763 -
Pte6g02185 364 Gene3D - 99 349 - -
Pte6g02185 364 FunFam Cyclin A1 217 349 - -
Pte6g02185 364 SUPERFAMILY Cyclin-like 88 227 IPR036915 -
Pte6g02185 364 SMART Cyclin_C_2 230 353 IPR004367 -
Pte6g02185 364 Pfam Cyclin, N-terminal domain 107 227 IPR006671 -
Pte6g02185 364 SUPERFAMILY Cyclin-like 230 355 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02185 Pte-Chr6 37765360 37766465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02185 1 361 Core Cell Cycle Gene Families AT1G47230 52.486 1.18e-129 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02185 K06627 - twl:120009204 418.313