Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02184 ATGGAGGCTACAATTGGAAGAGAAAGCCTTCATTTTTATGGTATGGCTCCCTCAGATTTGAGAGTACTAGGAAAGAAGTCTGTGGAATGGGATTTGAATGATTGGAGGTGGGATGGTGACCTTTTCATAGCTAGTCCTTTGAATCCTCTTCCTTCCCATGATGTAAGCCAGCAGTTTTTCCCTGTAGGCTCTGGGATTCCTGAGAACGGCACGTCCTCCAACAGTTCATCATCTTGCTCTGGCGAAGTAAGCCTTCGAATGGATAAGGGGAAGAGAGAATTGGACAAGAAAAGGAGAGCTTTTGTGGTGGAAGAGGACAGTGGAAACGAAGAAACTGGGAATCTCACCTTGAAACTTGGTGGCCACAATTATCCCTCTGCTGATAAGGAGGGAGCTAATTGGGATAGGAGTACTGGGAAGAAAACCAAATTGGGAGGAGGCACGCCAAATCGATCTATCTGTCAAGTAGAGGACTGTGGTGCCGATCTGAGTAAAGCCAAGGACTATCATCGCCGTCATAAAGTTTGTGAGATGCACTCAAAGGCCAGTAGGGCACTTGTGGCTAATGTGATGCAACGGTTCTGTCAGCAGTGTAGTAGATTTCATGTGCTTGAAGAGTTTGATGAAGGGAAAAGAAGCTGTCGGAGACGTTTGGCCGGCCACAATAAGAGAAGGAGGAAAACAAACAATGAGACTGTTCCCAGTGGAAGTTCGCCAAACGACGATCAGACGAGTAGTCACTTGTTAATTAATGTATTACGGATACTTTCCAACATGCACTCTAATAAATCGGATAAGAGTAGCGACCAGGATTTGTTATCCCATCTTCTAAAGAACCTTGCTAGTCAAAATGGAGACCATGGTGCTAAAAATATGTCTTCCCTGATGCTTGAACCTCAGAATTTGCTGAAAGGTTCAATTTCAGCTGGGAAGTCAGATATGGCTTCCACCTTGGTTTCAAATTATTCACAAGACCCTCCAAACCTTCTCAGAAAGCAGCTGACACCATCTGAAGTGCAACATGGTCATGATTCTAGAGATGTTGATATAGGGGCACCTCGTACCAAAACGAGCATCTTGGGCAGCCCTTCAGCCTATTCTGATGTCCGGGAGTGTACTTCTGGGCAAATGAAAATGAACAATTTTGATTTAAATGACATCTATATTGACTCAGATGATGGCACTGAAGATGTGGAGAGATCGCCTGCCACTACAAATATGGGGACAGGCTTTGTTGATTACTCTTGGGCGCAAGACTCTCATCAATCAAGCCCCCCTCAGACAAGTGGAAATTCAGATTCAGCATCTGCTCTGTCACCATCTAGTTCCAGTGGGGAAGCTTTGAGCCGTACAGATCGAATTGTGTTTAAGCTTTTTGGTAAAGAACCAAATGATTTCCCTCCTTTTCTTAGAGCACAGATGCTTGACTGGTTGTCACACAGTCCAACTGACATTGAAAGCTACATTCGGCCAGGATGTATTATTCTGACAATGTACCTGCGCCAGTCTGAGGCTGCATGGGAGGATCTTCATGGTGACTTGAGTTCTGGTTTAAAGAGGCTTGTTGATGTGTCTGACAATAACTTCTGGAGAAGTGGTTGGATGTTTATCAGGGTGCAGCATCAGATAGCCATTATTTTCAATGGTCAGGTTGTCATTGACTCACCATTGCCTTTCACAACTGGCATTCATAGTAAAATTTTGAGTGTTCAACCAATAGCAGTGTCAGCATCCGATAAAGCTCAATTTACAGTCAAGGGCATTAACCTCATTCAACCTGCTACAAGGCTACTATGTTCACTGGAAGGGAAATATCTGGTTCACGAACCTGCTAATGAATTGACAGATGATCCTGAATGCTCTGAGTTTGATGAGCTTCAGTGCATTAAATTTTGTTGTCCTATTCCTTCAACGAATGGAAGAGGATTTGTTGAGATTGAAGACCAGGGTCTTAGCAGCATCTTCTTTCCTTTCATAGTTGTGGAGGAGAATGTTTGCTCTGAAATCCGAGTGCTTGAGACTCTATTTGAATCAGAAGATAGTTACGCAGATAATTATGTGGCTGGAAAATTGGAAGCCAAGAATGAAGCTATGGAGTTTATTCATGAGTTGGGTTGGCTTCTCCACAGAAGTCAATTGAAGTCTAGATTGAGTAACTTGGAATTGACTGTGGAGCCCTTTCCTTTAAAACGGTTCAAGTGGCTTATGGAGTTCTCTGTGGACCATGACTGGTGTGCAGTGGTTCAAAAACTGTTGAACATTATGCTTAATGGAACTGTCGGAACTGGGGAACATTTGTCACTATATCACGCACTCTTGGAGATAAACCTTCTTCATAGAGCTGTAAGGAAGAATAGTAGACGATTAGTGCAGTTACTTCTGACATACGTTCCTGAAAACGTATCAGAAAATCGGGGGTCTGAAGACAAGGCAATACCCAGTGGTGTGGACAGAAGATACTTGTTTAGACCTGATGTTGTTGGTCCTGCAGGTTTGACCCCACTCCATATTGCTGCTGGAATAGATGATTCTGAGGATGTGCTTGATGCTTTAACTGAAGATCCTGACATGGTGGGTATTGAAGCTTGGAAGAATGCTCGTGACAGTACAGGATCCACTCCTGAAGATTATGCTAGGTTGAGAGGCCATTACAGCTACATCCACCTTGTGCAGAGGAAAATCAACAAGAGTCAGAGAGCTGGCCATGTAGTGGTAGAAATTCCAAGTGTTGTCACCGATGTTAGTAATGTAAACCGCAAGGAAAATGAGTCCATTGCTGGCTTTGAGATCGGAAAAGGCACGCAAAAATATCCCCAAGGGCAGTGCACACTTTGCGATCATAAATGGACTCACAGAATGGTGGGTTGCAGGTCTGTGGTATACAGGCCTGCGATGCTTTCAATGGTGGCCATTGCAGCAGTATGTGTATGTGTGGCCCTTCTGTTTAAAAGCGCACCTCAAGTTATGTATCCCTTCCGACCTTTCAGTTGGGAGTCATTGGATTACGGAACTATCTAA 3018 0.4397 MEATIGRESLHFYGMAPSDLRVLGKKSVEWDLNDWRWDGDLFIASPLNPLPSHDVSQQFFPVGSGIPENGTSSNSSSSCSGEVSLRMDKGKRELDKKRRAFVVEEDSGNEETGNLTLKLGGHNYPSADKEGANWDRSTGKKTKLGGGTPNRSICQVEDCGADLSKAKDYHRRHKVCEMHSKASRALVANVMQRFCQQCSRFHVLEEFDEGKRSCRRRLAGHNKRRRKTNNETVPSGSSPNDDQTSSHLLINVLRILSNMHSNKSDKSSDQDLLSHLLKNLASQNGDHGAKNMSSLMLEPQNLLKGSISAGKSDMASTLVSNYSQDPPNLLRKQLTPSEVQHGHDSRDVDIGAPRTKTSILGSPSAYSDVRECTSGQMKMNNFDLNDIYIDSDDGTEDVERSPATTNMGTGFVDYSWAQDSHQSSPPQTSGNSDSASALSPSSSSGEALSRTDRIVFKLFGKEPNDFPPFLRAQMLDWLSHSPTDIESYIRPGCIILTMYLRQSEAAWEDLHGDLSSGLKRLVDVSDNNFWRSGWMFIRVQHQIAIIFNGQVVIDSPLPFTTGIHSKILSVQPIAVSASDKAQFTVKGINLIQPATRLLCSLEGKYLVHEPANELTDDPECSEFDELQCIKFCCPIPSTNGRGFVEIEDQGLSSIFFPFIVVEENVCSEIRVLETLFESEDSYADNYVAGKLEAKNEAMEFIHELGWLLHRSQLKSRLSNLELTVEPFPLKRFKWLMEFSVDHDWCAVVQKLLNIMLNGTVGTGEHLSLYHALLEINLLHRAVRKNSRRLVQLLLTYVPENVSENRGSEDKAIPSGVDRRYLFRPDVVGPAGLTPLHIAAGIDDSEDVLDALTEDPDMVGIEAWKNARDSTGSTPEDYARLRGHYSYIHLVQRKINKSQRAGHVVVEIPSVVTDVSNVNRKENESIAGFEIGKGTQKYPQGQCTLCDHKWTHRMVGCRSVVYRPAMLSMVAIAAVCVCVALLFKSAPQVMYPFRPFSWESLDYGTI* 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02184 1005 MobiDBLite consensus disorder prediction 337 367 - -
Pte6g02184 1005 MobiDBLite consensus disorder prediction 218 244 - -
Pte6g02184 1005 FunFam Squamosa promoter-binding-like protein 14 146 215 - -
Pte6g02184 1005 MobiDBLite consensus disorder prediction 63 83 - -
Pte6g02184 1005 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 72 893 IPR044817 GO:0003677
Pte6g02184 1005 MobiDBLite consensus disorder prediction 63 87 - -
Pte6g02184 1005 MobiDBLite consensus disorder prediction 337 351 - -
Pte6g02184 1005 SUPERFAMILY Ankyrin repeat 765 889 IPR036770 -
Pte6g02184 1005 ProSiteProfiles Zinc finger SBP-type profile. 151 228 IPR004333 GO:0003677
Pte6g02184 1005 MobiDBLite consensus disorder prediction 112 146 - -
Pte6g02184 1005 Gene3D - 146 215 IPR036893 GO:0003677|GO:0005634
Pte6g02184 1005 Pfam SBP domain 154 227 IPR004333 GO:0003677
Pte6g02184 1005 Gene3D - 751 905 IPR036770 -
Pte6g02184 1005 MobiDBLite consensus disorder prediction 416 446 - -
Pte6g02184 1005 SUPERFAMILY SBT domain 153 232 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02184 Pte-Chr6 37751096 37757437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02184 24 1004 SBP-box Gene Family AT3G60030 53.561 0.0 914
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Pte6g02184 SBP 1.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02184 - - gmx:100814273 1299.26