Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02180 ATGGACGACTCCTGCGCTGTGTGTGCCGAACCTTTGGAATGGGTTGCCTACGGTTCTTGTGGCCACCGAGAGGTCTGCTCCACCTGTGTCGCTCGCCTCCGCTTCATTTGTGCGGATCGCCGTTGCTGCATCTGTAAAACCGAGTCCGATGTTGTTTTCGTCACCAAGGCCTTGGGAGATTATACAAGGATGATTAATGACTTCTCCGTCTTGCCAATTGAAGCAAGGGAGGGTCGGGTTGGGTCATACTGGTACCATGAGGATACACAAGGCTTTTTTGATGATGTGGATCACTACAAGATTATCAAAGCAATGTGCAGGCTTTCATGCAGTGTATGCGACAAGATGGAGGAGCCTCCACATGATGCATCCAGACGTGGAGGAGCATTTAGGAACATAAAGCAGCTGAAAGATCATTTATATCACCGACATAAGTTGTACATGTGCAATCTTTGTTTGGGAGGAAGAAAGGTTTTCATATGTGAACAAAAGCTCTATACTAAGGCTCAGTTGATTCAACATAAAAGCACAGGCGATTCTGAGGTGGATGGTAGTGAGAGTGAAAGAGGAGGTTTTATGGGGCATCCTTTGTGTGAATTCTGCCGATCGTCTTTCTACGGGGACAATGAACTATACACACACATGTCCACAGAACATTATACGTGTCATATTTGCCAAAGGCAGCATCCAGGACAGTATGAATACTACAAGGATTATGATGACCTAGAGATTCATTTCCGTCAAGAGCACTTCTTATGTGAAGATGAGGGTTGCCTTGGTAAGAAGTTTATTGTCTTCCAATCTGAAGCTGAGTTGAAGAGGCACAATGCAATGGAACATGGAGGCCGCATGTCACGGTCAAAACGTAATGCTGCTCTTCAGATACCAACAAGTTTTAGATATCGGCGAGGCAGCGAACAAGAAAATCGTCGCGGTAGAGGTAGCACTTTCCATCGTGATTTTGCTGAAGACCAACTCTCTATGGCCATTCAAGCAAGTCTGGAGACTGCTAATTCTGACAGCGCATTTCATGAACAATCTTCATCTAGTAATGGACAAGTTACTGATCGTTCCGAGCATGTTGATGTCAATCCTATCATTCAGCCATTTGAGTCATTGGCAACATCAGATTCTGAAGCACCTTCTAGGTACCGTCAAGCCTTGGGGCATAACTCGAGGCAAGCTGCTTTAGTAGAGTCTTCATTTCCTCCACTCTCTACGGCAAGCAGCAATAATCAACAGCTGTCTAATTTAAATGGTTTACCTAGCAATACTATGGCAGCTCATTTACGCCGCAAGAGCAAAAACAATGTTTCTGTTCTTAATTCCAGTAGAGGGTGGCCTGGTGCGAATCGAGGACCAGCTATTGTGTCAAGTAATCCGGTGCAATCTAGGCTCTTGAATAATCTTGCTCCTGAAATGCCTCGTGGTTCTGATCAGGTCAAGGCAAAAACAAGTGTTGCATTTGCGCCACCGACATATGCTAGCACTACTCAGGCCTGGGCTAAGACAGCAACTGCCGTATCTGCAAGTTCTTCAAGGAGTTCTCCTGACACCAGTAGGATTAGCCACTCCATTTCAGCTCCAAACCTAGTTGTAAGTGGGTCAACAACACCGTCGATCTCTGACTTCCCACCAGTTTCTGCTTCACAAGTCAGTAAGTTGCCTGTAAGCAAACAGTCTGATGCAACTGCAGAAAACATACATACTGCTAACAAGTCTTTGGTGGAAAAAATTCAAGTTGCACTTGAATACAATAAAGACAATTATGCTGCATTTAAAGATATATCTGCACAATATCGGCAAGGATTAATTGGCACGTCCAAGTACCTGGACTTTGTGCAAGAGTTTGGCTTGTCTCATCTCGTTCTTGAGTTAGCTAGACTATGCCCTGATCCTGAGAAGCAAAAAGAACTCCTAGAATCCTACAAAGTTAGAGTTGAAAGAAACTCTCTGCAAGAAAATGATCGGGCCAATGCTTCCACAAGAGATGTTAAAGTCTCTAGCAAAGGTAAAGGAAAGTTACTTGATGCTGAAGAGAGTAACTCAAGAGATATAGTGGCGAATAAAATATTTAGTAGTGTGAAGCATCTGCAATCAAGCTACAAGCCCTCTGAGGAAGAAGTGGAAGTGTTGTCAAAGGAAGGGTACCGTGCTGGAAAAGGCAAAGCAAAATTAATCAATGAGCAGCAGCATAATATTGTAACCAACTCTGGTGGTCAAGCTTTGAAGCTTGATGGACAAGACAATTCCTCTGTGGGGGGTATATCAAACCAAAATTCGCGGGATGGGGGTGGAGGGAGCAAGCAACGGAAGAAAGCCTCTAAATTCCTTAGAGCCCGCTTGGGTGATGGTTCTGCTGCAGCACTCCTAGATTTAAGAAATTCACATCTAGATGCCGATATGGACTCAGCTGACAGGAAACCACAAGTTGACCAGGATAACCCAGGAGGATTACCTGTGCGAGGTGTATGGAGAAATGGGGGCGGCAATAAGTTATTTTCTTAA 2508 0.4458 MDDSCAVCAEPLEWVAYGSCGHREVCSTCVARLRFICADRRCCICKTESDVVFVTKALGDYTRMINDFSVLPIEAREGRVGSYWYHEDTQGFFDDVDHYKIIKAMCRLSCSVCDKMEEPPHDASRRGGAFRNIKQLKDHLYHRHKLYMCNLCLGGRKVFICEQKLYTKAQLIQHKSTGDSEVDGSESERGGFMGHPLCEFCRSSFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKDYDDLEIHFRQEHFLCEDEGCLGKKFIVFQSEAELKRHNAMEHGGRMSRSKRNAALQIPTSFRYRRGSEQENRRGRGSTFHRDFAEDQLSMAIQASLETANSDSAFHEQSSSSNGQVTDRSEHVDVNPIIQPFESLATSDSEAPSRYRQALGHNSRQAALVESSFPPLSTASSNNQQLSNLNGLPSNTMAAHLRRKSKNNVSVLNSSRGWPGANRGPAIVSSNPVQSRLLNNLAPEMPRGSDQVKAKTSVAFAPPTYASTTQAWAKTATAVSASSSRSSPDTSRISHSISAPNLVVSGSTTPSISDFPPVSASQVSKLPVSKQSDATAENIHTANKSLVEKIQVALEYNKDNYAAFKDISAQYRQGLIGTSKYLDFVQEFGLSHLVLELARLCPDPEKQKELLESYKVRVERNSLQENDRANASTRDVKVSSKGKGKLLDAEESNSRDIVANKIFSSVKHLQSSYKPSEEEVEVLSKEGYRAGKGKAKLINEQQHNIVTNSGGQALKLDGQDNSSVGGISNQNSRDGGGGSKQRKKASKFLRARLGDGSAAALLDLRNSHLDADMDSADRKPQVDQDNPGGLPVRGVWRNGGGNKLFS* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02180 835 MobiDBLite consensus disorder prediction 303 317 - -
Pte6g02180 835 MobiDBLite consensus disorder prediction 740 773 - -
Pte6g02180 835 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Pte6g02180 835 MobiDBLite consensus disorder prediction 651 674 - -
Pte6g02180 835 MobiDBLite consensus disorder prediction 403 422 - -
Pte6g02180 835 PANTHER ZINC FINGER PROTEIN 598 1 733 IPR044288 GO:0061630|GO:0072344
Pte6g02180 835 ProSitePatterns Zinc finger C2H2 type domain signature. 198 219 IPR013087 -
Pte6g02180 835 MobiDBLite consensus disorder prediction 337 391 - -
Pte6g02180 835 MobiDBLite consensus disorder prediction 740 765 - -
Pte6g02180 835 MobiDBLite consensus disorder prediction 369 391 - -
Pte6g02180 835 SMART c2h2final6 108 144 IPR013087 -
Pte6g02180 835 SMART c2h2final6 251 280 IPR013087 -
Pte6g02180 835 SMART c2h2final6 220 250 IPR013087 -
Pte6g02180 835 SMART c2h2final6 196 219 IPR013087 -
Pte6g02180 835 CDD RING-HC_ZNF598 3 54 IPR041888 -
Pte6g02180 835 MobiDBLite consensus disorder prediction 337 358 - -
Pte6g02180 835 MobiDBLite consensus disorder prediction 298 317 - -
Pte6g02180 835 MobiDBLite consensus disorder prediction 801 835 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02180 1 836 C2H2 Transcription Factor Family AT3G62240 51.217 0.0 827
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02180 K22381 - qsa:O6P43_007308 1099.73