Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02174 ATGGTTGCTGAAGCAGATATTGTGTGCGAAAAAACGGTGCCTGTGCTAGATATTAAGTATTTGGGTAAAGGAAGCAATATTCATGAGGTTGAAGATGCAGCTGCGATTGCAAGCTCGCCCTTGCCTGAGATTTTTGATCGAATCCGGGTGACCGAATCTGCAGCTGCAGATTTATTGAGCAGAGAAGTAGAATTTAGTCCGTCAGACAGAACCCAAGTTGCGGCTGTTGAATCTGCGATGCTTCAATTTGTTCCTAGCATCCGTTCTGGTAGCTTTACTGACATTGGACCCCGGAGGTATATGGAAGACGAACATATAATGATTGATGACCTATCTTCACACATGGGGTTACTATATAGGTTCCCTAAACCAAATGCTTTTTATGGGGTATTCGATGGTCATGGAGGACCCGAAGCAGCAGCTTATGTCAGAAAGAATGTCATAAGGTTCTTTTTTGAAGATTCCAATTTCCCACAAACCTCTGAAGTCGATAGTATATTCTTGGAAGAGGTAGAGCTATCCATGCGCAAAGCATTTCTTACAGCTGATTTGGCTTTGGCGGATGATTGTGGTGTGAGCAGTTCATCTGGAACCACAGCAATTACTGCCCTTATATTTGGAAGGCTACTAATGGTAGCCAATGCTGGGGATTGCAGAGCAGTTCTCTGCCACAAAGGAGAGGCAATTGATATGTCTCAAGACCACAGACCCAATTATGCATCAGAGCGTACACGAGTGCTAGCATTGGGAAGTTACATTGATGATGGCTATCTTAACGGTGTGTTATCAGTTACTCGAGCTTTGGGGGACTGGGATATGAAATTTCCCCGGGGATCTTCACCTCTCATTGCGGAGCCCGAATTCCGGCGAATAGTTCTTACTGAGGACGATGAGTTCCTCATTATAGGCTGTGACGGGATTTGGGATGTGATGTCCAGTCAGCATGCTGTGAACCTCGTTCGTCGCAGCTTGAGGCGGCATGATGATCCAGAGCAGTGTGCTAGAGACCTTGTAATGGAGGCGTTGCGCCTCAACGCATTTGACAATCTGACGGTAATTATTGTCTGCTTTGCTTCTCTTGATCAAAGAGAAGCTTCTCTACCTCGACCTCAAATTAAAATGCTGTAG 1128 0.4539 MVAEADIVCEKTVPVLDIKYLGKGSNIHEVEDAAAIASSPLPEIFDRIRVTESAAADLLSREVEFSPSDRTQVAAVESAMLQFVPSIRSGSFTDIGPRRYMEDEHIMIDDLSSHMGLLYRFPKPNAFYGVFDGHGGPEAAAYVRKNVIRFFFEDSNFPQTSEVDSIFLEEVELSMRKAFLTADLALADDCGVSSSSGTTAITALIFGRLLMVANAGDCRAVLCHKGEAIDMSQDHRPNYASERTRVLALGSYIDDGYLNGVLSVTRALGDWDMKFPRGSSPLIAEPEFRRIVLTEDDEFLIIGCDGIWDVMSSQHAVNLVRRSLRRHDDPEQCARDLVMEALRLNAFDNLTVIIVCFASLDQREASLPRPQIKML* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02174 375 ProSiteProfiles PPM-type phosphatase domain profile. 88 357 IPR001932 -
Pte6g02174 375 SUPERFAMILY PP2C-like 82 358 IPR036457 -
Pte6g02174 375 FunFam Probable protein phosphatase 2C 22 71 360 - -
Pte6g02174 375 ProSitePatterns PPM-type phosphatase domain signature. 127 135 IPR000222 GO:0043169
Pte6g02174 375 PANTHER PROTEIN PHOSPHATASE 2C 82 355 IPR015655 GO:0004722|GO:0006470
Pte6g02174 375 Gene3D - 67 364 IPR036457 -
Pte6g02174 375 SMART PP2C_4 78 355 IPR001932 -
Pte6g02174 375 Pfam Protein phosphatase 2C 98 349 IPR001932 -
Pte6g02174 375 CDD PP2Cc 88 357 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02174 Pte-Chr6 37693168 37695408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02174 101 362 PP2C-type Phosphatase Gene Family AT3G62260 70.833 1.07e-138 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02174 K14803 - qsa:O6P43_007301 564.303