Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02173 ATGAAAGTCAGATATCGACACAATACTCTGTTAGTTCTCGAAGAGATTTCTCTTCACATTCATGGAGGAGAAAAGATTGGTGTTGTTGGCCGTACGAGTAGTGGGAAGTCAACTCTGATCCAGGTTTTCTTTAGGTTTATTGAACCAATTGGAGGTCAGATTATCATTGATGGTATAGACATCTGCGCACTAAGACTTCATGATCTTAGATGTCATTTTGGGATTATTCCCCAAGACCCTGTCCTCTCTGAGGGCACATTGAGAAGCAACATGGACCCACTTGACTTATATTCAGATGAGGAAATCTAG 309 0.411 MKVRYRHNTLLVLEEISLHIHGGEKIGVVGRTSSGKSTLIQVFFRFIEPIGGQIIIDGIDICALRLHDLRCHFGIIPQDPVLSEGTLRSNMDPLDLYSDEEI* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02173 102 Pfam ABC transporter 13 99 IPR003439 GO:0005524
Pte6g02173 102 Gene3D - 1 102 IPR027417 -
Pte6g02173 102 MobiDBLite consensus disorder prediction 83 102 - -
Pte6g02173 102 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 102 - -
Pte6g02173 102 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 99 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02173 Pte-Chr6 37688345 37691812 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02173 12 91 Calmodulin-binding Proteins AT2G36910 35.000 6.04e-14 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02173 - K05665 ini:109176272 156.377