Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02160 ATGGGTTTTGCTACGAAATTCCCTGCCTCCCTTGATTTGGAAGATTTACTCCAAAAGGCTATATTTGAAAATAATTACAGTACATACGGGTCGTTGTTGGATAAGGTGTTGGCAGCACAAGCCAAGAAGAAACCAAATAAGAAGAAAAATGTTGTAAGAGTGCTTGCCAAAAGGCAGAGATCATCGACAAGGGTTTTGATGAAGAGGCGAGCACGTTTAGAAGGTTGTAGGAGACGCAGCGGCAGTGGAATGGAAAGGAGGGTTAGAACTTTGAAGAGGCTAACACCAAAAAGCGAGTCTGTAGGGTTGGAGGGAGTCTTCAGAGAGACAACTGATTACATTTTGTCTTTGGAGATGAGAGTGAGAGTTATGCAGATTACGGTGGAGGCGTTGACAACTTCTAACAACGATGAGTATTGA 420 0.431 MGFATKFPASLDLEDLLQKAIFENNYSTYGSLLDKVLAAQAKKKPNKKKNVVRVLAKRQRSSTRVLMKRRARLEGCRRRSGSGMERRVRTLKRLTPKSESVGLEGVFRETTDYILSLEMRVRVMQITVEALTTSNNDEY* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02160 139 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 34 131 IPR044660 GO:0006355
Pte6g02160 139 CDD bHLH_AtIBH1_like 73 125 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02160 Pte-Chr6 37601038 37601457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02160 46 135 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 42.105 3.57e-17 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02160 - - palz:118046886 105.145