Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02158 ATGGCGAGAATCAAACCTCAGGCTTTATTACAACAGAGCAAAAAGAAGAAGGGACCTGCTCGAGTTAGCATCATCGCTATTATACTTTATGCATCGATCCTAGTTGTGCTTGCGTTTTTCCTCTACTCCTCATACAGATACTGGTATAGAAGGTCAAAATTTCAGACAGAAAATGACATAGCAGTTTCTGAGACTGAGAATGGTTTTGTGGACTCTAAGGATTCCGACTTTCCCAAATACGCTGTTCTAATTACCTCAAAAGGCTCTATAACAGTTGAACTTTATAAGGACAGCGCTCCTAAAGTTGTTGATGAATTTATTAAATTGTGTCAAAACGGGTACTTCAAGGGAAAGCTTTTTCATCGTGTAATTAAGCATTATGTGCTTCAAGCAGGAGACAATCAAGCAATAGGAGAAACTGAAGATTGGATGCTGAGAGGAAAGCATTACAATCAACTTCATACGAGTTTGAAACATGAGGCATTCATGCTTGGAACTTCCAAGGGAAAACAAGAAGACGAACCGTTCAAACTTTTTATCACAACTGCACCAATTCCGGATCTAAACGAGAAGCTTGTTGTATTTGGCCGGGTCATCAAGGGAGTGGATGTTGTTCAGGAAATTGAAGAAGTGGATACAGATGAACATTATCAGCCGAAACTCCCCATTACGATCCTTGACGTCACTCACAATCAGAAAGCCTGA 705 0.4014 MARIKPQALLQQSKKKKGPARVSIIAIILYASILVVLAFFLYSSYRYWYRRSKFQTENDIAVSETENGFVDSKDSDFPKYAVLITSKGSITVELYKDSAPKVVDEFIKLCQNGYFKGKLFHRVIKHYVLQAGDNQAIGETEDWMLRGKHYNQLHTSLKHEAFMLGTSKGKQEDEPFKLFITTAPIPDLNEKLVVFGRVIKGVDVVQEIEEVDTDEHYQPKLPITILDVTHNQKA* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02158 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 177 189 IPR002130 GO:0000413|GO:0003755
Pte6g02158 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 132 IPR002130 GO:0000413|GO:0003755
Pte6g02158 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 190 205 IPR002130 GO:0000413|GO:0003755
Pte6g02158 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 109 IPR002130 GO:0000413|GO:0003755
Pte6g02158 234 CDD cyclophilin 82 227 - -
Pte6g02158 234 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 1 232 - -
Pte6g02158 234 SUPERFAMILY Cyclophilin-like 75 230 IPR029000 -
Pte6g02158 234 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 83 229 IPR002130 GO:0000413|GO:0003755
Pte6g02158 234 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 77 230 IPR002130 GO:0000413|GO:0003755
Pte6g02158 234 Gene3D - 65 232 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02158 Pte-Chr6 37588802 37593249 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02158 80 229 U-box Gene Family AT5G67530 27.152 7.82e-17 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02158 - - qsa:O6P43_007268 348.591