Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02155 ATGGATAAGAGGCTGAAGGACAGGAAACAAGCAAAAATGAATGACAGTAGCCCCTCCCCGCAGTTGAAATCAGAGGTTTCTTCAGAGCAGAAAACAGAAACACAGGCAGCTAAAAAAAGGAAATTGGTTCACAAGACCGTTGTCAAAGTGAAAATAGGAGAAAATGTTGGCAAACTGAAGAACGAAGGACCACCTTCAGATCGCTGGTCTTGGAGAAAATATGGACAGAAACCTATCAAAGGATCTCCTTATCCCAGGGGCTACTACAAGTGCAGTACATCGAAGGGTTGCTCAGCCAAAAAGCAGGTGGAGAGATGCAGAACAGATGCTTCTGTGCTAATCATCACCTATACCTCAAGTCATAATCATCTTGACCCTGATTTGGATCGTCCATCTGCTACCGATCGGACAGTAGTATCCGAATCTCTAACCCAAACCACCACTAACAATCTCCCACCTCAGACAAATATGGATGACCGACGGCAAGAACATGGAGAGAAACATTGTCATCAACCAAATGAAGGAGATTCAAGTCCAGGTGATTTCCACTACTTGCAATCTCCAATACGACATTCCCAAGAAAATGTCATGATTGACCAATATGAAGATCCTTTCACGAATCTTGACGAGACTCAGGAAACAACAAGTTTGATCATCCAAGAAGAGCCCCCGTCTTGCTTCCAGCTTATGAACATCTCAACAACGAAATCAGATGAATACGACTTCTTCGATGAGCTTGAAGAGCTACCCACTTCTTCATCTTTCTCGAACTTCATGGCCAGCTATCTATCCCGCGAAAGGATTCCGGTTGCGCCCTCTTGA 822 0.4428 MDKRLKDRKQAKMNDSSPSPQLKSEVSSEQKTETQAAKKRKLVHKTVVKVKIGENVGKLKNEGPPSDRWSWRKYGQKPIKGSPYPRGYYKCSTSKGCSAKKQVERCRTDASVLIITYTSSHNHLDPDLDRPSATDRTVVSESLTQTTTNNLPPQTNMDDRRQEHGEKHCHQPNEGDSSPGDFHYLQSPIRHSQENVMIDQYEDPFTNLDETQETTSLIIQEEPPSCFQLMNISTTKSDEYDFFDELEELPTSSSFSNFMASYLSRERIPVAPS* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02155 273 MobiDBLite consensus disorder prediction 14 31 - -
Pte6g02155 273 MobiDBLite consensus disorder prediction 1 42 - -
Pte6g02155 273 ProSiteProfiles WRKY domain profile. 66 126 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte6g02155 273 MobiDBLite consensus disorder prediction 122 185 - -
Pte6g02155 273 SMART WRKY_cls 65 125 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte6g02155 273 SUPERFAMILY WRKY DNA-binding domain 62 124 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte6g02155 273 Gene3D WRKY domain 52 127 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte6g02155 273 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 11 257 IPR044810 GO:0003700
Pte6g02155 273 Pfam WRKY DNA -binding domain 67 123 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte6g02155 273 MobiDBLite consensus disorder prediction 157 174 - -
Pte6g02155 273 MobiDBLite consensus disorder prediction 57 77 - -
Pte6g02155 273 FunFam WRKY transcription factor 65 45 126 - -
Pte6g02155 273 MobiDBLite consensus disorder prediction 135 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02155 Pte-Chr6 37571697 37573466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02155 38 126 WRKY Transcription Factor Family AT3G58710 64.130 1.56e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte6g02155 WRKY 1.5e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02155 - - qsa:O6P43_010865 294.664