Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02153 ATGGAAAAACTTGCAAAAAATGGAGAGAGGCTACAAGATTATGTTTCACAGCTATTATCAGCAATGTCAACGAGGGAAGCTTTGCATGGAAAGGAAAGTGGAACTTCTCAGAAGCTTGCTAACAGGATTGAACATCCTGTTTACGAGCATACTGCATTTGACCAAGGTGTCGTGGATAAAGACCTCATGAACAGTCAAGAAATGTTGCTAGGAGTCACCAAGCTGCCATTTGTTGAAAAATTACCTCCATATGTAACTTGGATATTCTTGGACAGAAATCAGAGAATGGCTGAAGATCAGTCAGTAGTTGGGAGAAGAAGAATCTACTATGATCAACATGGAAGTGAAGCGCTTGTCTGCAGTGATAGTGAGGATGACATAGTAGAACCCGAAGAAGACAAACATGAATTTTCTGAGGGTGAAGATCAAATTTTATGGATGGCATTTCAGGAGCATGGGGTGGGTGAAGAGGTTGTGGGCTTACTTTGCCAAGTCATCGGATGTACTAGCTCTGAAATCCAGGAGCGATATGATGTGCTGAAAGACAAGTATAGAGAGAGCAGTAGCCCTCAATCTTCTGGAGGAAGTATGTCCCACATAGGCATCTCACTGGAGAAGAGTCTGAGTACTGCTTTAGATTCTTTTGATAACCTTTTCTGCCGGCGTTGCATGATGTTTGACTGCCGGCTACATGGGTGTTCCCAGCCTCTAGTGTACCCATGCGAAAAGCAACCAGTTTGGTCCGAACATGCGGAAGACAGGAAACCTTGCGGTGACAATTGTTACCTCAGGTCAAGAATCAATCAAGAGTTTTCAGCATGTGTCAGTGTGACTATCGGATCTTCATCCAATAACGAAAACATGAAATTAGACAAGGAAGACAGGGCAATTCCATCTGTTTATATAGAAAAAGCAGGTGCCGAGGACTGTAAAGATGCCTTACAAGTGGAGAAGAATGTATCTGAAACTGCAACTGTTAATTCAGATGTTGATCATGAAGAACGTCTGAGTTCAAATATGTCTAACTCTAACGTTTCTGGAAAAAGGAAGACTGGAACTCTCTCAGAAACTGCAAGATGTGACTTGACATTACTTTCTGATGTTTCTTTGTGCCATCCTTGTAAGAAACAGAAGAATGTATCAGATTCTAGACCAGTTACTGAAATTGGTCGGAATGACCCAAATATAGTAGAGAGACCTGCTGCAAGTACTGCAAATGAATCCACCTTGCCCAATAGTGCTTCATGTAAGGGAATCATTCTTGATGCATCTGCGCTTGTTAAAGATAGTGAATTAGTGCAGCTGCCTAATTTTGTAGATGCACAAGTTGAAGGGATGCCAAGTGTCACGAGATGGAAGCTTTTGGAAAATGAACTATACCTGAAGGGGATTGAGATGTTTGGGAAAAACAGTTGCCTCATATCTAGGAACTTACTCTCTGGTTTGAAGACATGCACCGAGGTCTATAGTTACATGCATGCTGGTGGAGTTTCAGTGCATGATAGGTCTGTAATGTGGCCAAGTTCTTGTATGGTCGATGATAGCAAAGCTGAGACTGAATATGCAGATCAAGATGTTCCAACAAGGTCACCTTTGCTCCGCAGAAGGGGCAAAACTCGGAAGCTGAAATATTCTTGGAAATCGGCTGGCCACCCATCACTTTGGAAGAGAATTGCTGATGGGAAAAACCAATCTTGTAAGCAGTACGTACCATGTGGATGTCAGTCTGTGTGTGGAAAGCAGTGCCCTTGTCTTCATAACGGAATCTGCTGTGAAAAATATTGTGGGTGCTCGAAGAGTTGCAAAAATCGATTCAGGGGATGCCACTGTGCAAAGAGTCAATGCAGAAGTCGACAGTGCCCATGCTTTGCTGCTGGACGTGAATGTGACCCTGATGTCTGTCGCAATTGCTGGGTTAGCTGTGGTGATGGCTCATTAGGCGAGCCTCCAAGACGTGGTGAAGGCCAATGCGGAAATATGAGGCTCCTTCTGAGGCAGCAACAAAGAATTCTATTGGCCAAATCAGATGTTGCTGGATGGGGAGCTTTTCTCAAGAACCCAGTTAACAAAAATGATTACCTTGGAGAATACACTGGTGAGCTGATCTCCCACCGGGAAGCAGATAAACGTGGGAAAATATATGATCGTGCGAATTCGTCTTTTCTTTTTGACTTGAATGATCAGTACGTTCTTGATGCTTTCCGCAAAGGAGATAAGCTGAAATTTGCAAACCACTCATCTAATCCAAACTGCTATGCAAAGGTGATGCTTGTTGCTGGAGATCATCGTGTAGGCATATTTGCCAAGGAACACATTGAAGCCAGTGAGGAGCTCTTCTACGACTATCGTTACGGTCCAGATCAAGCACCCATATGGGCTCGAAAACCTGAGGGATCAGGTTCCAAAAGAGATGATTCATCAGTCTCTCATGGCAGAGCGAGAAAACACCAGTCTCACTGA 2460 0.4362 MEKLAKNGERLQDYVSQLLSAMSTREALHGKESGTSQKLANRIEHPVYEHTAFDQGVVDKDLMNSQEMLLGVTKLPFVEKLPPYVTWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALVCSDSEDDIVEPEEDKHEFSEGEDQILWMAFQEHGVGEEVVGLLCQVIGCTSSEIQERYDVLKDKYRESSSPQSSGGSMSHIGISLEKSLSTALDSFDNLFCRRCMMFDCRLHGCSQPLVYPCEKQPVWSEHAEDRKPCGDNCYLRSRINQEFSACVSVTIGSSSNNENMKLDKEDRAIPSVYIEKAGAEDCKDALQVEKNVSETATVNSDVDHEERLSSNMSNSNVSGKRKTGTLSETARCDLTLLSDVSLCHPCKKQKNVSDSRPVTEIGRNDPNIVERPAASTANESTLPNSASCKGIILDASALVKDSELVQLPNFVDAQVEGMPSVTRWKLLENELYLKGIEMFGKNSCLISRNLLSGLKTCTEVYSYMHAGGVSVHDRSVMWPSSCMVDDSKAETEYADQDVPTRSPLLRRRGKTRKLKYSWKSAGHPSLWKRIADGKNQSCKQYVPCGCQSVCGKQCPCLHNGICCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGEGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAFRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGPDQAPIWARKPEGSGSKRDDSSVSHGRARKHQSH* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02153 819 SMART CXC_2 603 640 IPR033467 -
Pte6g02153 819 Pfam SET domain 679 782 IPR001214 GO:0005515
Pte6g02153 819 SMART set_7 668 789 IPR001214 GO:0005515
Pte6g02153 819 CDD SET_EZH 668 784 - -
Pte6g02153 819 ProSiteProfiles CXC domain profile. 555 654 IPR026489 -
Pte6g02153 819 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 2 819 IPR025778 GO:0031519
Pte6g02153 819 MobiDBLite consensus disorder prediction 324 350 - -
Pte6g02153 819 FunFam Putative histone-lysine N-methyltransferase EZH2 569 785 - -
Pte6g02153 819 ProSiteProfiles SET domain profile. 668 783 IPR001214 GO:0005515
Pte6g02153 819 SUPERFAMILY SET domain 564 788 IPR046341 -
Pte6g02153 819 Gene3D SET domain 569 785 IPR046341 -
Pte6g02153 819 MobiDBLite consensus disorder prediction 797 812 - -
Pte6g02153 819 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 2 818 IPR045318 GO:0006338|GO:0042054
Pte6g02153 819 Pfam CXC domain 607 638 IPR041355 -
Pte6g02153 819 MobiDBLite consensus disorder prediction 791 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02153 Pte-Chr6 37541059 37547251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02153 657 786 C2H2 Transcription Factor Family AT2G23740 26.531 4.38e-09 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pte6g02153 SET 1.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02153 - K11430 qsa:O6P43_010861 1073.92