Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02133 ATGTGTGGTGGTGCTATCATATCTGAACTCATCCCTCGATACCGTGGCCGTCGTCTTGACGCCTCGGATATCTGGCCCCACACAGTCTGCAACGTGTCTGAGTCAGATCTCTTTCATATTGACCATGATGCCACAGTTCCTCTTAAAAGGCCCCAGCCCGCTTCAGGTGATGAGCGAGTAGAGAAGTCCGCCAAGAGGCAGAGGAAGAATCTCTATAGAGGGATTCGCCAACGTCCATGGGGTAAATGGGCAGCTGAGATACGTGACCCTAGAAAAGGGGTACGTGTTTGGCTTGGTACTTTCTGCACTGCTGAAGAAGCAGCTAGGGCCTATGACAGAGAGGCGCGCAAGATACGTGGAAAAAAAGCCAAAGTCAATTTCCCCAATGAAGATGACGCCTACTCCATGCAAACTGATCAGCCTCCTCTTCCACCTCTTGGACATCTCAACTCTCCTCCTCCTCCTCCTCCTTATTCAGGTTGCGATGACAGTGCTAATGTGAATCATGTCTCCAAAAACCTCAATTTGGGTTTTGGATATGATCTCAATCAAATGGGTGCAATCCCCGAGACCGTGGTTGGTGCTGCCAAGGCCGACTCTGTTGGCTTTTCTAGTGAAGAAAGTTATGTATTTTGGTCGGGCACAGAAGGAAAGAATTCATCATTTGAGATCTTTTCTTCCAATCCGAACGCGATTGGCACAGTCTCTGACCCTCAAACCAAGGTTAATCCTGAAGTGAAGAAACTGATGAAGGAAGCTATGAATGAAGCTCAAGAGGAAGAGAATGAAGTGCAGAAGCTGTCTGAAGATCTCCTGGCGTATGAGAATTACTTGAAATTCTATCAGCTTCCATACGACGATGGTCAGTACAACGTGACAGTGCAAAACCCTCCCGCTCAGGAAGATGTGGTCGGTGATCTTTGGAACTTTGAAGACGCTGGGGTTGCTGCGTCTGGGACATCAGCGACAGTTTAA 975 0.4831 MCGGAIISELIPRYRGRRLDASDIWPHTVCNVSESDLFHIDHDATVPLKRPQPASGDERVEKSAKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFCTAEEAARAYDREARKIRGKKAKVNFPNEDDAYSMQTDQPPLPPLGHLNSPPPPPPYSGCDDSANVNHVSKNLNLGFGYDLNQMGAIPETVVGAAKADSVGFSSEESYVFWSGTEGKNSSFEIFSSNPNAIGTVSDPQTKVNPEVKKLMKEAMNEAQEEENEVQKLSEDLLAYENYLKFYQLPYDDGQYNVTVQNPPAQEDVVGDLWNFEDAGVAASGTSATV* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02133 324 Gene3D AP2/ERF domain 71 129 IPR036955 GO:0003700|GO:0006355
Pte6g02133 324 SUPERFAMILY DNA-binding domain 71 129 IPR016177 GO:0003677
Pte6g02133 324 CDD AP2 72 129 IPR001471 GO:0003700|GO:0006355
Pte6g02133 324 MobiDBLite consensus disorder prediction 54 68 - -
Pte6g02133 324 MobiDBLite consensus disorder prediction 48 68 - -
Pte6g02133 324 ProSiteProfiles AP2/ERF domain profile. 71 128 IPR001471 GO:0003700|GO:0006355
Pte6g02133 324 Coils Coil 243 277 - -
Pte6g02133 324 MobiDBLite consensus disorder prediction 128 154 - -
Pte6g02133 324 Pfam AP2 domain 72 120 IPR001471 GO:0003700|GO:0006355
Pte6g02133 324 PRINTS Ethylene responsive element binding protein signature 72 83 IPR001471 GO:0003700|GO:0006355
Pte6g02133 324 PRINTS Ethylene responsive element binding protein signature 94 110 IPR001471 GO:0003700|GO:0006355
Pte6g02133 324 PANTHER DNA-BINDING DOMAIN 57 252 IPR044808 GO:0003700|GO:0009873
Pte6g02133 324 SMART rav1_2 71 134 IPR001471 GO:0003700|GO:0006355
Pte6g02133 324 FunFam Ethylene-responsive transcription factor 2 70 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02133 Pte-Chr6 37397316 37398839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02133 1 193 AP2-EREBP Transcription Factor Family AT3G16770 40.179 2.72e-40 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte6g02133 AP2 2e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02133 K09286 - qsa:O6P43_010814 318.161