Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02131 ATGGAGCCAATCTCGCACGCTCAGTTGGATCATTGTACCACTTTTCCCATGATTCCTTGCCGGAAATTGTCTCTCAACCAGCCATTAATGAGATGCTCTAAGTTTCACCTTGTCCCTTCTTTCCAAAGTGGATCATTTGCCAAGGCCATGAGGATTGAAACACTAGTCCAACACACTGGATCAGTTGCCAGGGCCACGAGAATCGACATGCCAGTACAAGAGTCCAATTTTACTGCCTCTTACCTCATTAACTCGTGTGGCCTGGCTCCAGAAGCCGCTGATTCACTTTCCAAGAAGCTAAAGCTGCGCTCACCTGAAAAATCTGACGCCGTTCTTACTCTATTGAGAAACCATGGCTTCTCGGAAAAGCAGATTACTAAGCTTGTCACTAACCGCCCTTGGCTTCTTTTAGCTAAACCTGAAGTTACCCTCTTACCGAAGCTCAAGTTTTTGCAGTCTATCGGGGTTCCCAACACTGTACTTGCAATAATCCTGTCTAAGGATCCATCCATTCTGACCAGAAGTTTGGAGAAGCAAATAATTCCTTCCTATAACTTTCTGAAGAGTGTGTTGTTGTCAGATGCAAAAGTTGTTACTGCTCTAAAGCGCTCGACTTGGATATTCCTTGATGATCCGAACAAGAATGTCGTACCCAATCTTGAAGTCCTGAGAGAAATCGGCACACCAGATTATTGCATTTCATTGTTGCTAACTCATTTCCCTGCAGCAATGTTTCAGAAGAAGGAGGCATTTAGAAAAATTGTAGAAAAGGTGAAGGAGCTAGGGTTTGATCCTACGAAATCAACATTTGTGTTGGCAATTCGCGCTATGAGTGGTAAAGGGAAAAAATCTATATATAATCAATGTAAGGAGGTTTATCGGAGTTGGGGCTGGACTGAGGATGACATTCTTTTGGCATTCAAGAAGCACCCCCATTGTATGGTATTGTCCGAGAAGAAAATAACAGAGACAATGGAATTTCTTGTGAACAAGATGGGATGGCCATCACGAATGATAGCAACGTGTCCGGTTGTGTTATTTTATCGCTTGGAGGAGAGGATTAAACCGAGGTGTTCAGTTGTTCGAGCTTTGCAATTGAAAGGTTTGGTAAAGAAGAATTTGAGTTTGTATTCTGTCTTGTTACCTCATGAGGAAGGTTTCATGGATACTTTTGTGATGAAGTACATAGATAAAGTTCCAGAATTGTTGAGTGTGTATCGTGGAGAGCTTGATTTTGAAAGTGTTGTTTGA 1251 0.4237 MEPISHAQLDHCTTFPMIPCRKLSLNQPLMRCSKFHLVPSFQSGSFAKAMRIETLVQHTGSVARATRIDMPVQESNFTASYLINSCGLAPEAADSLSKKLKLRSPEKSDAVLTLLRNHGFSEKQITKLVTNRPWLLLAKPEVTLLPKLKFLQSIGVPNTVLAIILSKDPSILTRSLEKQIIPSYNFLKSVLLSDAKVVTALKRSTWIFLDDPNKNVVPNLEVLREIGTPDYCISLLLTHFPAAMFQKKEAFRKIVEKVKELGFDPTKSTFVLAIRAMSGKGKKSIYNQCKEVYRSWGWTEDDILLAFKKHPHCMVLSEKKITETMEFLVNKMGWPSRMIATCPVVLFYRLEERIKPRCSVVRALQLKGLVKKNLSLYSVLLPHEEGFMDTFVMKYIDKVPELLSVYRGELDFESVV* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02131 416 SMART mt_12 162 193 IPR003690 GO:0003690|GO:0006355
Pte6g02131 416 SMART mt_12 198 229 IPR003690 GO:0003690|GO:0006355
Pte6g02131 416 SMART mt_12 126 157 IPR003690 GO:0003690|GO:0006355
Pte6g02131 416 SMART mt_12 234 264 IPR003690 GO:0003690|GO:0006355
Pte6g02131 416 SMART mt_12 336 370 IPR003690 GO:0003690|GO:0006355
Pte6g02131 416 SMART mt_12 304 335 IPR003690 GO:0003690|GO:0006355
Pte6g02131 416 Pfam mTERF 285 387 IPR003690 GO:0003690|GO:0006355
Pte6g02131 416 Pfam mTERF 112 265 IPR003690 GO:0003690|GO:0006355
Pte6g02131 416 Gene3D Transcription termination factor 3, mitochondrial 174 399 IPR038538 -
Pte6g02131 416 PANTHER CGI-12 PROTEIN-RELATED 75 395 IPR003690 GO:0003690|GO:0006355
Pte6g02131 416 FunFam Mitochondrial transcription termination factor-like 176 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02131 Pte-Chr6 37382850 37385001 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pte6g02131 mTERF 3.3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02131 K15031 - qsu:112019279 449.129