Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02122 ATGGCTTATACCAAGTTTGTAACACTCCCAATTCTCATCCTCCTCCCCACGTTTGTTTCAGTAATTGCAGACTTCCCTTTTACCAATCCCGTCTCTCCCGAAACAGTTTGCCAGTCCACCCCAGATCCATCTTACTGCAACTCTGTCCTCCCAAACAACCAAACATCTAATGTCTATGACTACGGCCGGCTTTCCCTGCGCAATTCCTTATACCAATCCCGCAAATTCTTATACTTAGTTGAGTGGTACCTACAAAGTGGTTCTAGCTTGTCCACCACAGCAGTCCGTGCCCTTGAAGATTGCCAGTTGCTGGCGGGGCTGAACATTGATTTCCTATCAAGTGCTTTAGATAAAGTGGATAACACAAATCAAACACTGCCCGGTGAGCAAGCTGACGATGTCCATACATTGCTCAGTGCTATCCTTACCAACCAACAAACTTGCCTGGATGGTCTGCAAACGACTACCTCAGCATGGAACGTGAAAAATGGACTTGCATTTCCAATTAATAATGATACAAAGCTTTACAGTGTTTCTCTAGCTCTATTTACAAAAGGTTGGGTGCCAAAAATAAAGAAAGGGAGTGTGTGGCGCCCAAATAAGAAACAGCCTGCTGGACATGGGCGTTTAGATCTCAAAATGTCAAGCAGAACCCGTGAAATATACGATCTAGCTAGACATCACCATGGTCGGAAACTTCTCCAGTACACCACGGCGTCTATTATGGATGGTCAGGTTCTTGTGCGCGACATTGTGACAGTAAGTCAAAATGGAGATGGCAACTTTACAACCATCAATGATGCAATCGTTGCAGCCCCAAACAAGTCCGCATCTGCTGATGGTTACTTCGTGGTCTATGTCACGGCAGGCATGTATGAAGAATACGTGTCTATTCCAAAGAACAAATGGAATTTGATGATGATTGGAGATGGAATCAATCAGACAATTATCACAGGCAACCGCAGTGTTGTTGATGGCTGGACAACTTTCAATTCCGCCACATTTGCTGTGGTTGCACCCGGATTCTTGGCAGTGAATATAACGTTTCGGAACACTGCTGGGGCAATCAAGCATCAAGCCGTTGCAGTTCGAAATGGTGCAGACTTGTCCACATTTTATAGCTGCAGCTTTGAAGGGTACCAGGACACGTTATACACACATTCTCTTCGACAATTTTACAGAGAATGTGACATTTATGGTACGGTGGACTTCATATTTGGTAACGCCGCAGTTGTTTTGCAAAATTGCAACTTGTATCCACGCCTACCCATGAGTGGCCAATTCAACGCGATCACTGCTCAAGGAAGAACAGATCCAAATCAAAATACTGGAACGTCGATTCATAATTGCACAATCAAAGCAGCTGATGAATTGGGTCTGAGTAACGCTACCGTTGACACATACTTGGGAAGGCCATGGAAGCAGTACTCAAGGACGGTGTATATGCAAACCTACATGGATAGTTTGATCCACCCAACTGGTTGGCGAGCTTGGAATGGTGACTTTGCGTTGAGCACACTGTACTATGCTGAGTACAGTAACAGTGGACTTGGGTCAAGCACGGCCAGCAGAGTAACATGGCCTGGTTACCATGTCATCGACCCAACGGATGCCGCTAAATTTACGGTGTCTAACTTCTTGCTAGGAAATGACTGGCTGCCTCGTACAGGAGTACCTTACATCGCTGAGTTGATGTGA 1698 0.4547 MAYTKFVTLPILILLPTFVSVIADFPFTNPVSPETVCQSTPDPSYCNSVLPNNQTSNVYDYGRLSLRNSLYQSRKFLYLVEWYLQSGSSLSTTAVRALEDCQLLAGLNIDFLSSALDKVDNTNQTLPGEQADDVHTLLSAILTNQQTCLDGLQTTTSAWNVKNGLAFPINNDTKLYSVSLALFTKGWVPKIKKGSVWRPNKKQPAGHGRLDLKMSSRTREIYDLARHHHGRKLLQYTTASIMDGQVLVRDIVTVSQNGDGNFTTINDAIVAAPNKSASADGYFVVYVTAGMYEEYVSIPKNKWNLMMIGDGINQTIITGNRSVVDGWTTFNSATFAVVAPGFLAVNITFRNTAGAIKHQAVAVRNGADLSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVLQNCNLYPRLPMSGQFNAITAQGRTDPNQNTGTSIHNCTIKAADELGLSNATVDTYLGRPWKQYSRTVYMQTYMDSLIHPTGWRAWNGDFALSTLYYAEYSNSGLGSSTASRVTWPGYHVIDPTDAAKFTVSNFLLGNDWLPRTGVPYIAELM* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02122 565 ProSitePatterns Pectinesterase signature 2. 398 407 IPR033131 -
Pte6g02122 565 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 185 IPR035513 -
Pte6g02122 565 CDD PMEI-like_3 35 187 - -
Pte6g02122 565 SUPERFAMILY Pectin lyase-like 249 561 IPR011050 -
Pte6g02122 565 Pfam Plant invertase/pectin methylesterase inhibitor 34 182 IPR006501 GO:0004857
Pte6g02122 565 Pfam Pectinesterase 252 549 IPR000070 GO:0030599|GO:0042545
Pte6g02122 565 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 185 IPR035513 -
Pte6g02122 565 PANTHER PECTINESTERASE 22 554 - -
Pte6g02122 565 Gene3D - 247 564 IPR012334 -
Pte6g02122 565 NCBIfam pectinesterase inhibitor domain 34 184 IPR006501 GO:0004857
Pte6g02122 565 FunFam Pectinesterase 245 564 - -
Pte6g02122 565 FunFam Pectinesterase 34 185 - -
Pte6g02122 565 SMART PMEI_2 28 182 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02122 Pte-Chr6 37337930 37339735 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02122 12 565 Carbohydrate Esterase AT4G02330 61.150 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02122 K01051 - jre:108994109 815.068