Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02112 CTTACTGTGAAGTATTTACTTTATTCAGGATGTGGGAAGAGGACGGCTCTTAGATATGTTGCTGGTCGTTTGGGCCTTCATGTGGTGGAGTATAGCTGTCATGATCTAATGGCATCATCTGAGAAGAAGACATCTGTTGCACTTGCTCAAGCTTTCATCACAGCTAACAGGTACTCACCTACAATACTTTTTCTTCGACATTTTGATATTTTCCGCCATGTTCATTCTCTTGATGGTTTGCCAAATGACCAAAATGGCATGATGTCAGAAGTTGCATCAGTTATTCGAGAGTATACAGAACCAATTACTGATGATGAATTCCTGTTAGTAGCTGCTGCTGAGAGCTCTGAAGGCATGCCAACCAATATCAGACGCTGCTTTAGTCATGAAATAAGCATGGGGCCTCTGACTGAAGAGCAAAGGACTGAAATGTTGTCCCAGTCCCTTGGAAGCATTTCTGACCTTTTAAGCAATAGTTATGTGAAGGAAATAGTTGGCCAAACATCTGGTTTCATGCTTAGGGACATGCGTGCTTTAATTGCTGATGCTGGTGCAAACTTATTTCCCTCAGGCAAGACTGCTGTGGAGGAAGTTAAGCCTGAAATAGTTCGATCAGCTTGTCCTGAAGTGGTCCAAGGCAGCAAACTTGAGAAAGCTGCAACAGAGTCTCAATCAAAAGAAGAAGACTTGATGAAGGCCTTGGAAAGATCAAAGAAGAGAAATGCATCGGCATTAGGGACTCCTAAGGTCCCCAATGTGAAATGGGAAGATGTTGGGGGGCTGGAGGATGTGAAAAAGGCTATCCTAGACACCGTCCAGTTGCCTCTCCTGCATAAAGACTTATTTTCATCTGGACTTAGGAAACGCTCTGGTGTTCTGCTCTATGGCCCTCCTGGAACTGGAAAAACCTTATTAGCAAAAGCTGTTGCGACGGAATGCTCCTTAAATTTTTTGAGTGTAAAAGGACCTGAGCTGATCAACATGTACATAGGAGAGTCTGAGAAGAATGTCAGGGACATATTCCAAAAGGCAAGGACAGCCCGCCCGTGCGTTATCTTCTTTGATGAGCTTGATTCTCTTGCTCCTGCTCGTGGTGCTTCTGGTGACTCAGGGGGTGTTATGGACAGAGTGGTTTCTCAGTCTTTTATCGAATTGACTATTTTGCAGGATCTCTTTATAATAGGAGCAAGTAACCGACCAGATTTAATTGATCCAGCGCTGCTGCGACCTGGACGATTTGATAAACTGTTATATGTTGGAGTAAACTCTGATCCATCATACAGGGAGCGGTAGGTCCTTAAAGCCCTTACCCGGAAGTTCAAGTTGCATGAAGACATTTTGCTTTATTCTATAGCCAAAAGATGCCCTCCAAACTTTACGGGTGCAGATATGTATGCCCTGTGTGCAGATGCTTGGTTTCATGCTGCCAAACGCAAGGTATGCCTATCTATACCCACCAGGAGTGTCTTGGGAGAATTATCTCCGTCACTCTCGATGAATGAGCTCAAGAAATATGAGAACCTTAGAGATCAATTTGAAGGCACACAGAAG 1551 0.4404 LTVKYLLYSGCGKRTALRYVAGRLGLHVVEYSCHDLMASSEKKTSVALAQAFITANRYSPTILFLRHFDIFRHVHSLDGLPNDQNGMMSEVASVIREYTEPITDDEFLLVAAAESSEGMPTNIRRCFSHEISMGPLTEEQRTEMLSQSLGSISDLLSNSYVKEIVGQTSGFMLRDMRALIADAGANLFPSGKTAVEEVKPEIVRSACPEVVQGSKLEKAATESQSKEEDLMKALERSKKRNASALGTPKVPNVKWEDVGGLEDVKKAILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARTARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQSFIELTILQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDPSYRERXVLKALTRKFKLHEDILLYSIAKRCPPNFTGADMYALCADAWFHAAKRKVCLSIPTRSVLGELSPSLSMNELKKYENLRDQFEGTQK 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02112 517 CDD RecA-like_PEX6_r2 264 419 IPR047533 -
Pte6g02112 517 ProSitePatterns AAA-protein family signature. 391 409 IPR003960 GO:0005524|GO:0016887
Pte6g02112 517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 251 481 IPR027417 -
Pte6g02112 517 Pfam ATPase family associated with various cellular activities (AAA) 292 420 IPR003959 GO:0005524|GO:0016887
Pte6g02112 517 Pfam ATPase family associated with various cellular activities (AAA) 10 132 IPR003959 GO:0005524|GO:0016887
Pte6g02112 517 PANTHER AAA-FAMILY ATPASE 9 514 - -
Pte6g02112 517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 210 IPR027417 -
Pte6g02112 517 FunFam Peroxisomal biogenesis factor 6 250 435 - -
Pte6g02112 517 Gene3D - 422 480 - -
Pte6g02112 517 Coils Coil 216 236 - -
Pte6g02112 517 Gene3D - 250 421 IPR027417 -
Pte6g02112 517 Gene3D - 5 156 IPR027417 -
Pte6g02112 517 SMART AAA_5 288 424 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02112 Pte-Chr6 37216506 37221585 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02112 249 513 Calmodulin-binding Proteins AT3G56690 45.018 3.37e-62 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02112 K13339 - qsu:112003596 741.495