Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02104 ATGACTGAATCTCCAGCATACCCAGATCCTTCTTATCTCGAAGACCAACACAAGAACCGTAATACCTCAAGAACTGTTGATTCTAAGCGTCCGTGTGACTACTGTGGAGACTCTACGGCACTTCTTTACTGCAGAGCTGACTCAGCTAAGCTGTGTCTCAACTGTGACCGAGAGGTTCACTCTGCTAATCAGCTCTTCTCTAAGCATACACGGACTCAGCTCTGTGATGCATGCAATGATTCCCCTGCTACTATACTATGTTCCACTGAGAACTATGTTTTCTGTCAGAATTGCGACTGGGAGAGGCACAGCCTTTCACTGTCTCCAGTTCATGAACGCAGGCCCATTGAAGGGTTTACCGGGTGCCCTTCTGTGACTGAATTGTTGGCCTTTGTGGGCTTGGAGGACTTGAGCAAGAAAGCTCTGGTGTTGACTGATGATAGTGGCTGTTATGGCGGAGAGACTGATGGATTTATAGGAAGCGAGTTTGATGGGCTATCAAACTTGTTGGACTGGGATCATGCACCTCCTTCTATTCGAAGTCTTGATGATTTAATCCTCTCTACCAGTTCTTCTCACAATTACAACCCCATGGAAGTCCCTCCGCTGCCTAAGAATCGCAGGTGTGGCCAGCAAAAAGAAGAAATACTTGGTCAGCTTCGTCAAATGGCTAAATCAGAACCCGAATCGAATCACGGAGATGATGATGATGGGTTGCTGAAAGACACGCAAGCCATTTTGCGTGAAAATTTGCAGGAAAGCAACCGTTCTACATGTTTTGATCTTGAAAGCAAGGCTGATTTGTTGGCTTATCAGGAGGAAGGAGAATTTCAGTACCATATTGATAATAGTGAGCCTGGAACTCATGTTTTTGTTCGTGATGCGTCATTAAGAAGTTATCCAAAGGAAAGTCCAGGAGAGAGTCATACCAATGGCAATATAGAAGGGCAATCACAACTGCCAGTTTACTCTCAGAATGTAGCAATCGTTCCTAAAATTGCTCCGTATGAGTTATCTAGTCAAGAACGGGACTCTGCTATATCGAGATACAAGGAGAAGAGGAAAACAAGAAGATATGAAAAGCACATTAGATATGAATCAAGGAAACTTCGTGCAGAAAGCAGAACGAGAATTAAAGGGCGATTTGCCAAGATAGATCCCTGA 1164 0.4442 MTESPAYPDPSYLEDQHKNRNTSRTVDSKRPCDYCGDSTALLYCRADSAKLCLNCDREVHSANQLFSKHTRTQLCDACNDSPATILCSTENYVFCQNCDWERHSLSLSPVHERRPIEGFTGCPSVTELLAFVGLEDLSKKALVLTDDSGCYGGETDGFIGSEFDGLSNLLDWDHAPPSIRSLDDLILSTSSSHNYNPMEVPPLPKNRRCGQQKEEILGQLRQMAKSEPESNHGDDDDGLLKDTQAILRENLQESNRSTCFDLESKADLLAYQEEGEFQYHIDNSEPGTHVFVRDASLRSYPKESPGESHTNGNIEGQSQLPVYSQNVAIVPKIAPYELSSQERDSAISRYKEKRKTRRYEKHIRYESRKLRAESRTRIKGRFAKIDP* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02104 387 ProSiteProfiles CCT domain profile. 343 385 IPR010402 GO:0005515
Pte6g02104 387 CDD Bbox1_BBX-like 31 74 - -
Pte6g02104 387 SMART bboxneu5 27 74 IPR000315 GO:0008270
Pte6g02104 387 SMART bboxneu5 75 116 IPR000315 GO:0008270
Pte6g02104 387 MobiDBLite consensus disorder prediction 13 28 - -
Pte6g02104 387 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 31 384 - -
Pte6g02104 387 MobiDBLite consensus disorder prediction 1 28 - -
Pte6g02104 387 Pfam B-box zinc finger 29 73 IPR000315 GO:0008270
Pte6g02104 387 ProSiteProfiles Zinc finger B-box type profile. 70 116 IPR000315 GO:0008270
Pte6g02104 387 Pfam CCT motif 343 384 IPR010402 GO:0005515
Pte6g02104 387 ProSiteProfiles Zinc finger B-box type profile. 27 74 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02104 Pte-Chr6 37174267 37177832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02104 30 358 C2C2-CO-like Transcription Factor Family AT2G47890 42.566 2.24e-71 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Pte6g02104 zf-B_box 1.1e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02104 - - qsa:O6P43_010720 441.039