Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02090 ATGGGTTCGAAGCCATGGCTGCACCCAGCTCCAACCTATCGAACTTTGGAGACATACTGGGACACGGATGAGGATGCTCCCGGTCCTCGTTGTGGTCACACTCTCACTGCCGTTGCTGCCACTAAATCTCACGGTCCACGTCTCATCCTATTCGGTGGTGCAACCGCCATTGAATCATCCGCCCCTGGAATTCGATTAGCTGGTGTTACAAATGCAGTTCATTCCTATGATGTTCTTACCAGAAAATGGACCAGGATTAAACCTGCTGGTGATCCACCCTCTCCACGAGCTGCTCATGCTGCAGCTGCCGTTGGAACTATGGTTGTGTTTCAGGGGGGAATAGGTCCTGCCGGGCATTCAACAGATGACCTTTACGTGCTTGATTTGACCAACGATAGGTACAAATGGCATAGAGTTGTGGTGCAAGGACAAGGGCCTGGACCTCGCTATGGCCATGTGATGGACTTGGTTGCACAGAGATATCTTGTTACTGTCAGTGGCAACGATGGAAAAAGGGTTCTATCTGATGCTTGGGCTTTAGATACTGCACAGAAACCATATGCATGGCAAAGGCTGAACCCAGAAGGTGATAAACCTTCAGCTAGAATGTACGCAACTGCTAGTGCTCGGTCGGATGGCATGTTCTTGTTGTGTGGTGGAAGAGACTCTTCTGGTGTGCCGCTATCTGATGCATATGGGCTTCTCATGCATAGAAATGGGCAGTGGGAATGGACACTTGCACCTGGAGTTTCCCCTTCACCAAGGTATCAGCATGCTTCGGTTTTCGTGGGTGCAAGGTTGCATGTAACTGGAGGCGTTCTGCGGGGAGGACGCACAATAGAAGGTGAAGTAACTATTGCAGTACTGGACACTGCTGCTGGAGTTTGGTTGGATAGGAATGGGCTTGTGACCTCCTCACGTAATAATAAAGGACATGTGGATCATGATCCTTCATTGGAGTTGATGCGTCGTTGTCGCCACGCTGCAGCTTCAGTCGGTGTTCGTATATATGTTCATGGTGGTCTTAGAGGAGATGTTCTGTTGGATGATTTTCTAGTTGCTGAAAATTCTCCATACCAATCTGATATTAACTCTCCTATACTAACACCTGAGAGAGCTCCATCTAGTCCAACCTCCAATCTAAACCATTCAAACTTAATTTCTAGTAAGACAAAACCAACTTCCAGCGGTGGTCTAGAAGTTAACTCCTCTGGTGGTTTGGGGAGCATGGACAAAAACTCTATGGAGAAACTGAGGGAAGCTTCTGCAGCTGAAGCTGAGGCAGCTAGTGCTGTTTGGCAGGCAGTGCAGGCAGCATCTTGTCCTGTCGAGGAAACATCTATATCAGAAGAAAACCTACAAGCAGCTGAAACAGCTTCTGATGGTAGTGATACAGAGGCAGACGTTCGTCTTCATCCCAGAGCCGTTGTAGTAGCTAAGGAGGCTGTAGGCAACCTGGGTGGAATGGTTAGACAGTTATCTCTGGATCAATTTGAGAACGAGAGTAGGAGAATGATGCCTGCAAGCAATGATTCACCATATCCTACCAAAAAGTTTGCTAGACAAAAATCACCTCAGGGATTACATAAAAAGATAATATCTACTTTGCTGAGGCCTAGAAACTGGAAAGCTCCTACGAATAGGCGTTTTTTCTTGGATTCTTACGAAGTGGGCGAGCTTTGCTACGCTGCAGAACAGATCTTTATGCATGAACCAACTGTTCTTCAGCTGAAAGCTCCCATTAAAGTATTCGGAGATCTTCATGGGCAGTTTGGTGATTTAATGCGGCTATTTGATGAGTATGGATTTCCTTCTACAGCAGGGGACATCACGTATATTGACTACCTGTTCTTGGGAGATTATGTTGACCGAGGTCAGCATAGCTTAGAGACCATTACCTTACTCCTTGCTCTTAAGATCGAGTATCCTGAATATGTTCACTTAATACGTGGAAATCATGAAGCTGCTGACATAAATGCATTATTTGGTTTTCGAATCGAGTGCATTGAGAGGATGGGTGAAAGTGATGGAATTTGGGCTTGGACAAGATTTAATCAACTTTTCAATTATCTCCCACTTGCTGCCCTAATTGACAAGAAAATTATTTGTATGCATGGTGGAATCGGAAGGTCAATTAATTCAGTGGAACAGATAGAAAAGATCGAAAGGCCCATAACAATGGATGCTGGGACTATAATATTAATGGATCTTCTGTGGTCTGACCCAACTGAAAACGATAGTGTAGAGGGTTTAAGACCAAATGCACGAGGTCCTGGTCTTGTCACATTTGGGCCTGATCGTGTCACAGAATTCTGCAAGAAAAATAAGTTACAGCTCATTATAAGGGCCCATGAATGCGTCATGGATGGGTTTGAAAGATTTGCCCAAGGACAATTGATAACTCTTTTTTCTGCAACCAACTATTGTGGCACGGCAAACAACGCTGGAGCCATATTGGTGATAGGAAGGGGTTTAGTAGTGGTTCCAAAACTAATTCATCCCTTACCACCTCCCCTGCTATCGCCCGAAGCATCTCCTGAGCACGGGGCAGATGATACATGGATGCAGGAGCTTAACATTCAGAGACCGCCAACCCCAACACGTGGTCGACCACAACCTGATCTGGATCGCAGTTCTCTTGCTTACATATGA 2652 0.4593 MGSKPWLHPAPTYRTLETYWDTDEDAPGPRCGHTLTAVAATKSHGPRLILFGGATAIESSAPGIRLAGVTNAVHSYDVLTRKWTRIKPAGDPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDRYKWHRVVVQGQGPGPRYGHVMDLVAQRYLVTVSGNDGKRVLSDAWALDTAQKPYAWQRLNPEGDKPSARMYATASARSDGMFLLCGGRDSSGVPLSDAYGLLMHRNGQWEWTLAPGVSPSPRYQHASVFVGARLHVTGGVLRGGRTIEGEVTIAVLDTAAGVWLDRNGLVTSSRNNKGHVDHDPSLELMRRCRHAAASVGVRIYVHGGLRGDVLLDDFLVAENSPYQSDINSPILTPERAPSSPTSNLNHSNLISSKTKPTSSGGLEVNSSGGLGSMDKNSMEKLREASAAEAEAASAVWQAVQAASCPVEETSISEENLQAAETASDGSDTEADVRLHPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMMPASNDSPYPTKKFARQKSPQGLHKKIISTLLRPRNWKAPTNRRFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPIKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPEYVHLIRGNHEAADINALFGFRIECIERMGESDGIWAWTRFNQLFNYLPLAALIDKKIICMHGGIGRSINSVEQIEKIERPITMDAGTIILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTEFCKKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVIGRGLVVVPKLIHPLPPPLLSPEASPEHGADDTWMQELNIQRPPTPTRGRPQPDLDRSSLAYI* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02090 883 FunFam Serine/threonine-protein phosphatase 517 856 - -
Pte6g02090 883 Pfam Kelch motif 93 130 - -
Pte6g02090 883 MobiDBLite consensus disorder prediction 362 422 - -
Pte6g02090 883 Gene3D - 6 191 IPR015915 GO:0005515
Pte6g02090 883 Pfam Calcineurin-like phosphoesterase 580 787 IPR004843 GO:0016787
Pte6g02090 883 PIRSF STPPP_BSU1 1 883 IPR012391 GO:0004721|GO:0009742
Pte6g02090 883 Gene3D - 192 360 IPR015915 GO:0005515
Pte6g02090 883 SUPERFAMILY Metallo-dependent phosphatases 533 843 IPR029052 -
Pte6g02090 883 PRINTS Serine/threonine phosphatase family signature 776 796 IPR006186 GO:0016787
Pte6g02090 883 PRINTS Serine/threonine phosphatase family signature 648 672 IPR006186 GO:0016787
Pte6g02090 883 PRINTS Serine/threonine phosphatase family signature 716 743 IPR006186 GO:0016787
Pte6g02090 883 PRINTS Serine/threonine phosphatase family signature 615 642 IPR006186 GO:0016787
Pte6g02090 883 PRINTS Serine/threonine phosphatase family signature 686 712 IPR006186 GO:0016787
Pte6g02090 883 PRINTS Serine/threonine phosphatase family signature 580 607 IPR006186 GO:0016787
Pte6g02090 883 PRINTS Serine/threonine phosphatase family signature 798 814 IPR006186 GO:0016787
Pte6g02090 883 Pfam Serine-threonine protein phosphatase N-terminal domain 531 578 IPR031675 -
Pte6g02090 883 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 8 883 - -
Pte6g02090 883 SMART pp2a_7 552 838 IPR006186 GO:0016787
Pte6g02090 883 ProSitePatterns Serine/threonine specific protein phosphatases signature. 649 654 IPR006186 GO:0016787
Pte6g02090 883 Gene3D - 515 844 IPR029052 -
Pte6g02090 883 SUPERFAMILY Kelch motif 68 355 IPR015915 GO:0005515
Pte6g02090 883 MobiDBLite consensus disorder prediction 856 883 - -
Pte6g02090 883 FunFam Serine/threonine-protein phosphatase 9 189 - -
Pte6g02090 883 MobiDBLite consensus disorder prediction 362 410 - -
Pte6g02090 883 CDD MPP_Bsu1_C 532 828 IPR041758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02090 Pte-Chr6 37084731 37094022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02090 581 779 Calmodulin-binding Proteins AT5G63870 32.174 3.12e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02090 K01090 - pvy:116108766 1549.26