Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02088 ATGGTACGTAATGATATCGGGAGCAGACCTCTAGCTGTCAAGAAGCCACCGTCAAAAGACCATCACAATAAGGTTGATGACCATGGACGTCGTATACATATGCCGATTATTTGTGCCGCTTGTGACTTTCTACTTACTCGCGAGATTGGATCCGATGGTCAGACCATTGAGTGGCTTCTCCGTCAGGTAGAGTCGTCTATTATAGTCGCTACGGACGGGCATCACTCCTGCTAG 234 0.4829 MVRNDIGSRPLAVKKPPSKDHHNKVDDHGRRIHMPIICAACDFLLTREIGSDGQTIEWLLRQVESSIIVATDGHHSC* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02088 77 ProSiteProfiles TCP domain profile. 18 70 IPR017887 -
Pte6g02088 77 MobiDBLite consensus disorder prediction 1 27 - -
Pte6g02088 77 Pfam TCP family transcription factor 18 73 IPR017887 -
Pte6g02088 77 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 11 72 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02088 Pte-Chr6 37072164 37072397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02088 12 71 TCP Transcription Factor Family AT5G08330 77.419 4.36e-26 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pte6g02088 TCP 1.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02088 K16221 - gmx:100800443 96.2857