Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02087 ATGAAGGAAAAAATGGATTCTCCAGTTGGAGTTCTAGAGGACTATTTTAGAAGCTCAGATTCTGAGACTAGTTCTTCCAAAGAACCAGCTGAAACTCAAGGCAAAAACAAGCCATCACGATGGGGTGGATTTCTCCAGCTACTGAAATCTAAATCAAAGAAACACTCGGCTTTATCAAATCCTTTGACTTCCCTGAAAGTCTCATGGAGGAGCAGTAGTATGAGAGAGACTAAAATGCAGAGCTTACAAGTAGATTCAGATATTCAACATCAAAATTCTTCATGGAAGAGCTTCTCCATGCAAGAGATACAAACTGCAACGAATTGTTTTAGCCCAGAAAATTTGATTGGCAAAGGCGGGTATGCTGAAGTGTACAAGGGTCGTTTGAGAGGTGGTCGGCTTGTGGCAGTAAAAAAACTAACGAGAGGGACGCAGGATGAGGTAATAGGCGATTTCTTATCAGAGCTTGGCATAATGGCTCATGTCAACCATCCCAACACTGCTAAACTCATTGGATATGGTGTGGAAGGAGGAATGTACTTAGTACTTGAGTTGTCCAAGCAAGGGAGCTTAGCTTCTCTGCTATATGGGTCAAAGGAAAACTTGCCTTGGCATATTAGGTATAAAATTGCACTTGGAGTAGGTAATGGTTTGTTGTATCTCCATGAGGGCTGTCAAAGAAGAATTATCCACAGAGATATCAAGGCTGCAAATATTTTGCTTACAGATGACTTCCAGCCTCAGATATGTGATTTTGGGTTAGCAAAATGGCTCCCTGAACAGTGGACTCATCTGACAGTGTCAAAATTTGAAGGAACATTTGGCTACCTTGCTCCAGAGTACTTGCTTCATGGCATTGTAGACGAAAAGACAGATGTCTTTGCATTGGGTGTGTTGCTGTTGGAACTAGTCACCGGCCGACGAGCACTCGATTATTCACGGCAAAGTCTTGTTCTGTGGGCAAAACCATTGCTTAAGAAGAATGCATTCAGGGAGCTGATTGATCCTTCTCTGGCTACTGACTATGACCCACGGCAGACAAATCTGGTTCTTTGGGTTGCATCTTTATGCATACAACAAACATCAATTCGTCGGCCATCCGTGAGTCAGGTGGTGCAACTTCTAAATGGAAAGGTTAGCTGCTATAAGCAGCGCATGAAGAAAAGTCGAATACCTTTCATCCGTAGAGCTTTCCAGGAAGAACTCCTTGAATCTGAAGTCTGA 1224 0.4289 MKEKMDSPVGVLEDYFRSSDSETSSSKEPAETQGKNKPSRWGGFLQLLKSKSKKHSALSNPLTSLKVSWRSSSMRETKMQSLQVDSDIQHQNSSWKSFSMQEIQTATNCFSPENLIGKGGYAEVYKGRLRGGRLVAVKKLTRGTQDEVIGDFLSELGIMAHVNHPNTAKLIGYGVEGGMYLVLELSKQGSLASLLYGSKENLPWHIRYKIALGVGNGLLYLHEGCQRRIIHRDIKAANILLTDDFQPQICDFGLAKWLPEQWTHLTVSKFEGTFGYLAPEYLLHGIVDEKTDVFALGVLLLELVTGRRALDYSRQSLVLWAKPLLKKNAFRELIDPSLATDYDPRQTNLVLWVASLCIQQTSIRRPSVSQVVQLLNGKVSCYKQRMKKSRIPFIRRAFQEELLESEV* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02087 407 Gene3D Phosphorylase Kinase; domain 1 79 184 - -
Pte6g02087 407 ProSitePatterns Protein kinases ATP-binding region signature. 116 139 IPR017441 GO:0005524
Pte6g02087 407 Gene3D Transferase(Phosphotransferase) domain 1 187 395 - -
Pte6g02087 407 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 86 185 - -
Pte6g02087 407 MobiDBLite consensus disorder prediction 1 41 - -
Pte6g02087 407 MobiDBLite consensus disorder prediction 17 32 - -
Pte6g02087 407 SMART serkin_6 110 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g02087 407 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 187 389 - -
Pte6g02087 407 Pfam Protein kinase domain 113 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g02087 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Pte6g02087 407 PANTHER OS08G0249100 PROTEIN 6 404 IPR046958 -
Pte6g02087 407 ProSiteProfiles Protein kinase domain profile. 110 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g02087 407 SUPERFAMILY Protein kinase-like (PK-like) 90 375 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02087 Pte-Chr6 37065052 37068021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02087 69 391 Receptor kinase-like Gene Family AT1G53420 38.369 1.40e-70 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pte6g02087 Pkinase 3.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02087 - - qsa:O6P43_010679 573.548