Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02076 ATGGGAAACACAGGCATAAGGTGCACAGTCATTTTGATAGGAAGCTCAAAGTGGCCCTTACACACTCAAATACCGAGGGGCTACAAGCGTTTCTTTAAAAGAACGTTGTTGGAGACATCAGACTACCTAAAAGATGATTGCCTCTCAAGCACAACCCTTTGGTCCTATGAAGGATCTGAACATTCAGTGTATAAAGTTGAAGACATGGAGGCTTTGCTGCTTTTTATATACTGGGATGAGCTGCTTGACATGCAAGAATTTGCTGGTTCGAACACAAAATGGGCATCTACCTTGATGGCGCAACATTTGCTTGCTGCAGCAGATCGCTACGGTTTAGAGAGGCTCAGGTTAATGTGTGAAGCAAGTCTATGTGACACTGTGGCCATAAGCACTGTAGCAACAACTCTAGCTTTGGCAGAACAGCACCATTGTTTACAATTGAAAGCCGTCTGTCTCAGACTTATTGCAATGCCAGAAAATTTGAGAGCTTGCATGCAAAATGGATGGTTTTGA 513 0.4347 MGNTGIRCTVILIGSSKWPLHTQIPRGYKRFFKRTLLETSDYLKDDCLSSTTLWSYEGSEHSVYKVEDMEALLLFIYWDELLDMQEFAGSNTKWASTLMAQHLLAAADRYGLERLRLMCEASLCDTVAISTVATTLALAEQHHCLQLKAVCLRLIAMPENLRACMQNGWF* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02076 170 Gene3D Potassium Channel Kv1.1; Chain A 8 120 IPR011333 -
Pte6g02076 170 Gene3D - 121 168 - -
Pte6g02076 170 Pfam BTB/POZ domain 37 125 IPR000210 GO:0005515
Pte6g02076 170 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 63 154 IPR045005 GO:0016567
Pte6g02076 170 SUPERFAMILY POZ domain 33 125 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02076 Pte-Chr6 37002072 37006072 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pte6g02076 BTB 5.1e-06 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02076 K10523 - nnu:104612884 168.703