Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02057 ATGGATAATCACCAGTCTTGCTCACAAACCAAAATCACCGGTGGCCGACGTAGCTTGAAAAGGAAGCTGGAGCAAGATTTAAGGGAAGACGATGGCGGTGATCGAGTTCAAGCCGATCGCAAGGTTTTGGTTCTCGATCCTCACGAAGCTCCTTTAGATCTGGTCCCTAAAGTTGCCGCTCAGGTTGAGATTCTCAACTCTACTTCATCTTCATCCACCGAGTCCGATCGTGCTGCGGCCAAACGAGCTGTCCATTTTATTTCTGATCTCGCCAAGAATGAAGACGTTGTAAACATGTTAGTTGATTCTGGAGTCGTTCCTGCTCTAGTAAAACATTTACACGTGCCGGATGATGGCTCTCATAGGCCTCAAGCGCACGAAGTAGAGAAGGGGAGTGCGTTCGCTCTGGGGCTTCTTGCAGTCAAACCAGAGTATCAACACCTTATTGTTGATACTGGAGCATTACCCCATCTTGTTAATTTGTTGAAGAGGCACAAGAATAGTGCTTATTCTCGGGCGCTTTGTGGTGTCATAAGGAGAGCAGCTGATGCAATCACTAACCTTGCTCATGAAAATAGCATCATTAAAACACGTGTCAGGATTGAAGGAGGAATCCCACCACTAGTTGAATTGCTTGAGTATGGTGACACGAAGGTACAAAGGGCAGCTGCTGGGGCCTTAAGGACTCTTGCATTCAAGAATGATGAAAACAAAAATCAGATTGTTGAATGCAATGTATTACCCACACTCATATTAATGCTGAGATCTACCGATTCTGCGATACATTATGAAGCGGTTGGTGTAATTGGGAATCTGGTTCATTCTTCTCCACTCATCAAGAGAGAAGTTCTTCTTGCTGGGGCTTTGCAACCTGTTATAGGATTACTCCGTTCCCCCTGTTATGAAAGCCAAAGGGAAGCTGCTTTATTATTGGGGCAATTTGCTGCAACTGACTCTGATTGCAAGGTGCACATTGTTCAGAGAGGTGCTATCCAGCCACTTATTGACATGCTTCGATCTCCTGATGCACAGTTGAGAGAGATGTCAGCATTTGCACTTGGGAGATTGGCTCAGGATACACACAACCAAGCTGGTATTGCTCAAAATGGAGGTATCGAGCCTCTACTTGCACTTATTAGCTCAAAAAATGGATCTCTGCAACACAATGCTGCATTTACTCTATATGGTCTTGCTGATAACGAGGATAACGTTGCAGACATCATCAAGGTTGGAGGTGTTCAGAAACTCCAAGATGGAGAGTTCAATGTTCAACCTACTAGAGAGTGTGTCGCAAAGACACTGAAAAGGTTGGAGGAGAAAATCAATGGGCGGGTACTGAAACATCTCTTATATCTGATGAGATTCTCAGAGAAGGTTGTGCAAAGGAGAGTTGCTCTCGCACTAGCTCACTTTTGTGCTCCTTGGGATCGAAGGAGTATTTTCATTGAGCACGAAGGACTTGAATTGCTTCTTGGTCTTCTGGATTCTACAAATCTGGCACAGAAACGGGATGCTTCATTGGCTCTACACAAGCTGGCTAACAAAGCAACGTCACACTCTGCCATTGATGCTGCTCCTCCCTCGCCAACTCCTCAGGTCTACTTGGGGGAGCAATATGTTAACAACTCTACGCTTTCTGACGTTACCTTCTTGGTTGAAGGCAAGCGGTTTTATGCTCATCGAATTTGTTTATTAGCTTCTTCTGATGCATTCCGTGCAATGTTTGATGGCGGTTACAGGGAGAAGGATGCCAAAGACATTAAGATTCCAAATATTAAATGGGAGGTTTTTGAATTGATGATGAGATTTATATACACGGGATCAGCAGACGTCAATTTAGATATGGCCCAGGATCTCTTGAGAGCTGCTGACCAGTATCTTCTTGACGGTCTTAAGCGTTTGTGCGAGTATGTGATTGCTCAGGACATTTCGGTGGACAATGTCTCCGTAATGTATGAACTTTCAGATGCCTTCAATGCTCTGTCATTAAGGCAAGCATGCATACTCTTCATATTGGATCAATTTGACAAGCTGAGTCCAAAGCCGTGGTATTGCCGCTTTGTCCACTCCATTGTACCGGATATACGGAAATACTTTACGAACATGCTTACAGAGTCAAATGAAGCAGTATCGCGGGGGCCCTAG 2145 0.4476 MDNHQSCSQTKITGGRRSLKRKLEQDLREDDGGDRVQADRKVLVLDPHEAPLDLVPKVAAQVEILNSTSSSSTESDRAAAKRAVHFISDLAKNEDVVNMLVDSGVVPALVKHLHVPDDGSHRPQAHEVEKGSAFALGLLAVKPEYQHLIVDTGALPHLVNLLKRHKNSAYSRALCGVIRRAADAITNLAHENSIIKTRVRIEGGIPPLVELLEYGDTKVQRAAAGALRTLAFKNDENKNQIVECNVLPTLILMLRSTDSAIHYEAVGVIGNLVHSSPLIKREVLLAGALQPVIGLLRSPCYESQREAALLLGQFAATDSDCKVHIVQRGAIQPLIDMLRSPDAQLREMSAFALGRLAQDTHNQAGIAQNGGIEPLLALISSKNGSLQHNAAFTLYGLADNEDNVADIIKVGGVQKLQDGEFNVQPTRECVAKTLKRLEEKINGRVLKHLLYLMRFSEKVVQRRVALALAHFCAPWDRRSIFIEHEGLELLLGLLDSTNLAQKRDASLALHKLANKATSHSAIDAAPPSPTPQVYLGEQYVNNSTLSDVTFLVEGKRFYAHRICLLASSDAFRAMFDGGYREKDAKDIKIPNIKWEVFELMMRFIYTGSADVNLDMAQDLLRAADQYLLDGLKRLCEYVIAQDISVDNVSVMYELSDAFNALSLRQACILFILDQFDKLSPKPWYCRFVHSIVPDIRKYFTNMLTESNEAVSRGP* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02057 714 Pfam BTB/POZ domain 539 641 IPR000210 GO:0005515
Pte6g02057 714 Gene3D - 441 523 IPR011989 -
Pte6g02057 714 Pfam Armadillo/beta-catenin-like repeat 318 357 IPR000225 GO:0005515
Pte6g02057 714 Pfam Armadillo/beta-catenin-like repeat 200 231 IPR000225 GO:0005515
Pte6g02057 714 Pfam Armadillo/beta-catenin-like repeat 234 273 IPR000225 GO:0005515
Pte6g02057 714 SUPERFAMILY ARM repeat 443 516 IPR016024 -
Pte6g02057 714 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 3 708 IPR044282 -
Pte6g02057 714 ProSiteProfiles BTB domain profile. 546 613 IPR000210 GO:0005515
Pte6g02057 714 MobiDBLite consensus disorder prediction 1 34 - -
Pte6g02057 714 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 104 154 IPR000225 GO:0005515
Pte6g02057 714 SUPERFAMILY POZ domain 537 640 IPR011333 -
Pte6g02057 714 Gene3D Potassium Channel Kv1.1; Chain A 524 672 IPR011333 -
Pte6g02057 714 Gene3D - 40 357 IPR011989 -
Pte6g02057 714 SUPERFAMILY ARM repeat 74 418 IPR016024 -
Pte6g02057 714 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 370 412 IPR000225 GO:0005515
Pte6g02057 714 SMART BTB_4 546 643 IPR000210 GO:0005515
Pte6g02057 714 Gene3D - 358 440 IPR011989 -
Pte6g02057 714 SMART arm_5 474 514 IPR000225 GO:0005515
Pte6g02057 714 SMART arm_5 276 316 IPR000225 GO:0005515
Pte6g02057 714 SMART arm_5 192 232 IPR000225 GO:0005515
Pte6g02057 714 SMART arm_5 93 141 IPR000225 GO:0005515
Pte6g02057 714 SMART arm_5 142 190 IPR000225 GO:0005515
Pte6g02057 714 SMART arm_5 234 274 IPR000225 GO:0005515
Pte6g02057 714 SMART arm_5 318 358 IPR000225 GO:0005515
Pte6g02057 714 SMART arm_5 359 399 IPR000225 GO:0005515
Pte6g02057 714 MobiDBLite consensus disorder prediction 17 34 - -
Pte6g02057 714 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 329 371 IPR000225 GO:0005515
Pte6g02057 714 CDD BTB_POZ_ARIA_plant 533 648 - -
Pte6g02057 714 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 203 238 IPR000225 GO:0005515
Pte6g02057 714 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 153 193 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02057 Pte-Chr6 36886755 36892731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02057 262 514 U-box Gene Family AT5G67340 25.746 2.67e-08 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pte6g02057 BTB 7.9e-27 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02057 - - sly:101256802 1023.85