Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02049 ATGGCAACAACAGAGAAGGCCGTGACAATTCGAACAAGAAAGTTCATGACCAATCGTCTTCTTTCCAGAAAACAATTCGTTATTGATGTGCTTCATCCTGGAAGACCTAATGTCTCTAAGGCTGAGTTGAAGGAAAAGCTGGCAAGGGTGTATGACGTCAAAGATACCAATGCTATCTTTGTCTTTAAATTTCGCACCCATTTTGGAGGTGGTAAATCAACTGGTTTTGGCTTGATTTATGATTCTGTTGAGAATGCAAAGAAGTATGAGCCCAAGTACAGGTTGATACGGAATGGATTAGCTACCAAGGTTGAGAAATCAAGGAAGCAGATGAAAGAAAGAAAGAACAGAACCAAAAAGATCCGTGGAGTAAAGAAAATAAAAGCTGGCGACGCTGCAAAGGGTGGGAAGAAGAAATGA 420 0.4071 MATTEKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARVYDVKDTNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLATKVEKSRKQMKERKNRTKKIRGVKKIKAGDAAKGGKKK* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02049 139 Hamap 30S ribosomal protein S24e [rps24e]. 6 108 IPR001976 GO:0003735|GO:0005840|GO:0006412
Pte6g02049 139 PANTHER 40S RIBOSOMAL PROTEIN S24 6 133 IPR001976 GO:0003735|GO:0005840|GO:0006412
Pte6g02049 139 FunFam 40S ribosomal protein S24 3 139 - -
Pte6g02049 139 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 8 110 IPR012678 GO:0003735|GO:0005840|GO:0006412
Pte6g02049 139 Pfam Ribosomal protein S24e 27 105 IPR001976 GO:0003735|GO:0005840|GO:0006412
Pte6g02049 139 ProSitePatterns Ribosomal protein S24e signature. 68 90 IPR018098 -
Pte6g02049 139 Gene3D - 1 134 - -
Pte6g02049 139 MobiDBLite consensus disorder prediction 104 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02049 Pte-Chr6 36830633 36832751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02049 5 134 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 86.154 7.04e-80 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02049 K02974 - csv:101209776 231.876