Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02041 ATGGCGAACAACCACCCTTCAGACCCTCCAACTGACGACTTTCTTGAGCAAATTCTTGGCCTTCCCAACTTTGCTCCCAGCGATTCCACCTTGGGTGGTGCTGATACCGGCTTGTCGGGTCCACATGCTCCTATGATGCTTCAAATCCACTCTGGCGATGCTTCTGCTCACCTTTCCCACGTGGGTGGTGCTGGAGCTGCTGCCTTTCATGGTCCTGCTATGTACCAGTTAGGGTTAAGTTTGGAACAAGGGAAATCTGCGTTCATGAAGACCGAGGAGCCTTCAGGCAGTGGCAAACGGTTTCGCGACGATGTTTCTGATTGCAGAGCTAAGAATGTGTTCCATGGGCAACCAATGCCTACAACTGCCACTGCTGCACCACATCCTCCAGCTATGCGCCCAAGGGTGCGCGCTCGGAGAGGACAGGCCACAGATCCACACAGCATTGCTGAAAGGTTGCGCAGGGAAAGAATAGCAGAGAGAATTAGGGCATTGCAAGAACTGGTTCCTAGTGTCAACAAGACAGATAGAGCTGCCATGCTTGATGAAATTGTGGATTACGTGAAGTTCCTAAGGCTCCAGGTCAAGGTCTTGAGCATGAGTAGGATTGGTGGAGCAGGAGCTGTGGCACCACTAGTAACAGATATTCCACTATCATCGATCAAGGAGGAAGGAGGTGAAGGTGGAGGAGATGAACCAGCTTGGGAGAAGTGGTCAAACGATGGCACAGAAAAACAGGTTGCTAAACTGATGGAAGAAAATGTTGGAGCTGCCATGCAATTCCTTCAGTCGAAGGCACTTTGCATCATGCCTGTCTCATTGGCGTCAGCAATATACCAATCACAACCCCTGGACACCTCTACTATCGTCAAGCCCGAATCGAATCCTCCATAG 894 0.5078 MANNHPSDPPTDDFLEQILGLPNFAPSDSTLGGADTGLSGPHAPMMLQIHSGDASAHLSHVGGAGAAAFHGPAMYQLGLSLEQGKSAFMKTEEPSGSGKRFRDDVSDCRAKNVFHGQPMPTTATAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRIGGAGAVAPLVTDIPLSSIKEEGGEGGGDEPAWEKWSNDGTEKQVAKLMEENVGAAMQFLQSKALCIMPVSLASAIYQSQPLDTSTIVKPESNPP* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02041 297 FunFam Basic helix-loop-helix transcription factor 137 199 - -
Pte6g02041 297 SMART finulus 148 197 IPR011598 GO:0046983
Pte6g02041 297 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 142 191 IPR011598 GO:0046983
Pte6g02041 297 MobiDBLite consensus disorder prediction 113 132 - -
Pte6g02041 297 Pfam Helix-loop-helix DNA-binding domain 147 191 IPR011598 GO:0046983
Pte6g02041 297 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 59 277 - -
Pte6g02041 297 Gene3D - 137 199 IPR036638 GO:0046983
Pte6g02041 297 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 140 201 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02041 Pte-Chr6 36774870 36780096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02041 69 297 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 76.271 6.02e-111 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte6g02041 HLH 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02041 - - qsa:O6P43_010567 427.943