Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02037 ATGGCAGAAGATTTCACTAAAGCCCATATGTTTGCTTCAGTCATTTCCAATTCAACTTCTTTGTCCGAAAAAACTAGTGTTTCTTCAGGTACAAGAACTCGAGACATCGGCAGTTTAAATATCGTGGTCTCAACCGTATCTTATCCGCAGCCACAGAAAAATAAGAGAAAGAGAAGTCTTCCAGGAAAGCCAGATCCAGATGCTGAAGTGATAGCCTTATCTCCCAAGACCCTCCTAGCTACGAACAGATTTGTGTGTGAGATCTGCAGCAAGGGTTTCCAGAGAGATCAGAACCTTCAACTTCACAGAAGAGGCCACAACCTTCCATGGAAACTGAAGCAAAGGAACGTCAATGAGTTCAAAAAGAAAGCTTATGTTTGTCCGGAACCATCATGCGTACACCACAATCCTGTAAGGGCTCTTGGTGATCTTACTGGAATTAAGAAACACTACTGTAGAAAACATGGAGAGAAGAAATGGAAATGTGAGCAGTGCTCAAAGATTTATGCAGTTCAGTCAGATTGGAAGGCACACGCTAAAATTTGTGGAACACGGGAGTACAAATGTGACTGTGGAATCCTTTTCTCCAGGAAGGACAGCTTCATTACCCACAGAGCATTCTGTGATGCATTAGCTGAAGAGAGTGCCAGAGTTTCAGCCAGACAATATGCTGCCAGTACAGACCCATTAGTCCAATATCTCTGCTCTAATATTGTCCCATCCCGACATATCTCTCTTATGCCATGCAGCCCATCACATGAAAACCCTAACCCTAACAGCGGCCAAAACCGAAACGTCTCCACTCAGATAAATCTCGAAACTCAACATCACCGCCTCCAAATCTCATCCGCTTCTCCTCCGTCAACGCTACCACCACCATCATTTTTCCAGGAACCACGACCAGGGAGCTTGGTAGGCTCACCCCATCAAATTCTCTATTTGACCACAGCTGCCACATCAAGCGCGAGTGCCTCTGCTAACCTGTGGGCCACTGCACTCCTCCAAAAGGCTGCTACAGTTGGTGGCGATGCCATGAGGGACACAGGAACGGTTTCTTCACCATTCGCTTATGCTGTTAAACACGTCAATGAGTCGGTGGGTCATGTGACTCAGAAAGACATGGACGGGTTAGAAGCGGTGAGCCGGCTTGACCCGTTTGGGCAAGTCTCCCTGGAGGACTCCATGGGTCGAGGTGGAATGTTCACGTTAAACGACCTCGCCAAGTGGCAGAAGTATGACAATCTGACTAGAGACTTTCTGGGTCTGACCGGAGATGCCAATCGTGTTGATCATGTCGGGGGAGGCAACGCTGGATTGGTTAAGTTTAGCATAGACGACAATGATGTGCTCACGTTTACGGATAGTGAAGAGTACCAACAACAAGAAGAATACGATCTTCCTCGTCACAGTCACGGTCAACTCTCGCTATTGGAGCCGCCGCAAAATCAAGGTCTCGGATTTGCTGAGATTGCCTATATCTCTGAGGCATGGGAACTGTGGACACAATGA 1509 0.4718 MAEDFTKAHMFASVISNSTSLSEKTSVSSGTRTRDIGSLNIVVSTVSYPQPQKNKRKRSLPGKPDPDAEVIALSPKTLLATNRFVCEICSKGFQRDQNLQLHRRGHNLPWKLKQRNVNEFKKKAYVCPEPSCVHHNPVRALGDLTGIKKHYCRKHGEKKWKCEQCSKIYAVQSDWKAHAKICGTREYKCDCGILFSRKDSFITHRAFCDALAEESARVSARQYAASTDPLVQYLCSNIVPSRHISLMPCSPSHENPNPNSGQNRNVSTQINLETQHHRLQISSASPPSTLPPPSFFQEPRPGSLVGSPHQILYLTTAATSSASASANLWATALLQKAATVGGDAMRDTGTVSSPFAYAVKHVNESVGHVTQKDMDGLEAVSRLDPFGQVSLEDSMGRGGMFTLNDLAKWQKYDNLTRDFLGLTGDANRVDHVGGGNAGLVKFSIDDNDVLTFTDSEEYQQQEEYDLPRHSHGQLSLLEPPQNQGLGFAEIAYISEAWELWTQ* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02037 502 Gene3D Classic Zinc Finger 139 218 - -
Pte6g02037 502 ProSitePatterns Zinc finger C2H2 type domain signature. 86 106 IPR013087 -
Pte6g02037 502 Gene3D Classic Zinc Finger 84 129 - -
Pte6g02037 502 FunFam protein indeterminate-domain 5, chloroplastic-like 138 217 - -
Pte6g02037 502 MobiDBLite consensus disorder prediction 47 67 - -
Pte6g02037 502 SUPERFAMILY beta-beta-alpha zinc fingers 83 180 IPR036236 -
Pte6g02037 502 ProSiteProfiles Zinc finger C2H2 type domain profile. 84 106 IPR013087 -
Pte6g02037 502 FunFam protein indeterminate-domain 12-like 63 131 - -
Pte6g02037 502 SMART c2h2final6 125 155 IPR013087 -
Pte6g02037 502 SMART c2h2final6 84 106 IPR013087 -
Pte6g02037 502 SMART c2h2final6 160 180 IPR013087 -
Pte6g02037 502 MobiDBLite consensus disorder prediction 278 301 - -
Pte6g02037 502 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 35 442 IPR031140 -
Pte6g02037 502 Pfam Zinc finger, C2H2 type 84 106 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02037 Pte-Chr6 36731177 36734034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02037 24 465 IDZ Gene Family AT4G02670 48.786 1.24e-118 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte6g02037 zf-C2H2 0.0087 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02037 K25870 - qsa:O6P43_010584 496.123