Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02033 ATGGAGCAGTATGAAATTCTGGAGCAGATTGGGAAGGGCTCTTTTGGTTCTGCTCTTCTTGTCCAGCACAAGCATGAAAAGAAAAGATATGTCCTCAAGAAGATCCGTCTTGCTCGCCAGACTGATAGAACCCGTAGATCTGCTCATCAGGAGATGGAGCTTATTTCTAGAGTACGCAATCCATTTATTGTTGAGTATAAAGATTCATGGGTGGAAAAGGGTTGCTTTGTGTGCATTGTCATAGGATATTGTGAGGGTGGAGATATGGCAGAGGCCATAAAGAAGGCCAATGGTGTTCATTTTCCTGAAGCGAAACTTTGCAAGTGGCTTGTTCAACTCCTAATGGCTCTTGATTACTTGCATGCCATCCATATTCTTCATCGTGATGTGAAGTGTTCAAATATATTTCTCACCAAAGATCAAGACATTAGGCTTGGTGATTTCGGTCTTGCTAAAATGTTGACATCTGATGATCTTGCTTCCTCAGTTGTTGGAACTCCAAGTTACATGTGTCCCGAGCTTCTAGCTGATATACCATATGGCTCCAAGTCAGATATCTGGTCCTTAGGATGCTGTATATATGAAATGGCTGCTCATAAACCAGCATTTAAAGCTTTCGATATGCAAGCTCTAATAAACAAAATAAACAAATCAATTGTGGCTCCTCTACCCACTACGTTTTCTGGTGCATTTCGAGGCCTTGTGAAAAGTATGCTGCGGAAAAATCCAGAGCTCAGACCAAGTGCTGCCGAGTTGCTGAATCATCCGCACCTCCAGCCTTATATTCTGAAGATTCACTTAAAATTGAATAGTCCCAGAAGAAATACTTTCCCACACCATTGGCCTGAGTCCAATTATGCAAGAGATCCATTCATGGCACAGGGCTCCGTTTCCACACACTCTGACACAGGAAGACGTCTGTCGTTCAGCAATGACAGGACCTTGAATCCAAGTATGTCTGGGACAGAGCGAGATTCTCAATATTCTTCTCAACTGGCATATGGGTTCTCCACTTTAAATGAGAAACTCTCTGAATTGTCTGTTCATTGCGTCCAAGACGACTTGCACACCCACAAATCGAAGACCATCAAGTTTTCAGTTGTTGATGTGACTCCAAGGTTGACACGGCCATCTGTCACACCCAGGAGGCAAACAACAACACCTTCTAAGCTACTTCATGTTTCTTCAAAACGTGATTCTCTACGAGCGTGTCAGACTCCAGCCATGAAGTCTTCCCAACAATCTCGTAGAGCATCCCTTCCCCTCCCAACAAGAGCTGTGACCTCAGAAAGCCCTTACAGAGGCAATGCTGGTTTCCTTGGCAGCATGGTCTCTCCTGATGTATCCGTCAATGCACCGAGATTCGACAAGATGACTGAATTCTCTCTGGCCTCTGAAGGCCCCATCCGGGCTCGTAGAACATCATCAACATCTGCGAAATGCTCCTCCAGTTCACCAGACAGTGCTGACTGCTCAATCACAAAGGACAAATGTACTGTCCAGTTTATAGACAAGCCCTGTGCCCGAATCAGCTTTAGCGATACCGGTGCTATTCCCACCACTGAAATTGGCAGCCATTGCTCTGATCAAAATGTTACAACAGGAGTCTCAAACCGCTCGTCCTCTGATTCGAGACAACGTAGGTTTGACACCTCGTCGTACCAGCAGCGTGCAGAGGCTTTGGAGGGCTTGCTTGAGTTTAGTGCCAGGCTCTTGAAAGAAGAGAGGTTCGAAGAGCTTGGGGTATTGCTGAAGCCGTTCGGTCCCGATAAGGTTTCTTCAAGAGAAACTGCTATTTGGTTGACCAAGAGTTTCAAAGAAACCACTGCCTAA 1833 0.4539 MEQYEILEQIGKGSFGSALLVQHKHEKKRYVLKKIRLARQTDRTRRSAHQEMELISRVRNPFIVEYKDSWVEKGCFVCIVIGYCEGGDMAEAIKKANGVHFPEAKLCKWLVQLLMALDYLHAIHILHRDVKCSNIFLTKDQDIRLGDFGLAKMLTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMAAHKPAFKAFDMQALINKINKSIVAPLPTTFSGAFRGLVKSMLRKNPELRPSAAELLNHPHLQPYILKIHLKLNSPRRNTFPHHWPESNYARDPFMAQGSVSTHSDTGRRLSFSNDRTLNPSMSGTERDSQYSSQLAYGFSTLNEKLSELSVHCVQDDLHTHKSKTIKFSVVDVTPRLTRPSVTPRRQTTTPSKLLHVSSKRDSLRACQTPAMKSSQQSRRASLPLPTRAVTSESPYRGNAGFLGSMVSPDVSVNAPRFDKMTEFSLASEGPIRARRTSSTSAKCSSSSPDSADCSITKDKCTVQFIDKPCARISFSDTGAIPTTEIGSHCSDQNVTTGVSNRSSSDSRQRRFDTSSYQQRAEALEGLLEFSARLLKEERFEELGVLLKPFGPDKVSSRETAIWLTKSFKETTA* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02033 610 MobiDBLite consensus disorder prediction 529 551 - -
Pte6g02033 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Pte6g02033 610 FunFam Serine/threonine-protein kinase Nek2 1 83 - -
Pte6g02033 610 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g02033 610 SUPERFAMILY Protein kinase-like (PK-like) 1 316 IPR011009 -
Pte6g02033 610 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Pte6g02033 610 MobiDBLite consensus disorder prediction 469 488 - -
Pte6g02033 610 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g02033 610 FunFam Serine/threonine-protein kinase Nek3 86 331 - -
Pte6g02033 610 Gene3D Transferase(Phosphotransferase) domain 1 86 310 - -
Pte6g02033 610 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Pte6g02033 610 MobiDBLite consensus disorder prediction 294 326 - -
Pte6g02033 610 MobiDBLite consensus disorder prediction 397 428 - -
Pte6g02033 610 MobiDBLite consensus disorder prediction 466 488 - -
Pte6g02033 610 CDD STKc_Nek 3 258 - -
Pte6g02033 610 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g02033 610 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02033 Pte-Chr6 36703175 36708977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02033 10 291 MAP Kinase Kinase Kinase AT1G53570 29.801 3.58e-38 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Pte6g02033 Pkinase 2.9e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02033 K08857 - cave:132172042 891.723