Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02021 ATGGGCACCGGCAAATACTATGACTGTGTCTTCTGCAAGAGAGGCTTCACCACAGCACAAGCTCTCGGTGGTCACATGAACATACACAAGAAAGATAGAGCAAGCAAGAAGGGCAGCTTACCTCCTCCTAGGTCAATTAAGGTTGGTGACAAGTATCTCAATCTTAAGCCCTACCCATCCATTCACAATCACAGGTTAATTCGTCCTCATTTTCACTCTGCTGCACCTGAGATACCAGCAGACCACCAAGATCATTACCTTGCCATTGCCGGCCCATCAAGGAGTAGTGGTTTGGTCGATAGACTCACATACAATGCACATCGCTACAAAGGTACAGATCAACGTGGTTGCAATCTGCTTGGAGATTGGAGGCCAGATTCGAGCTTATTACGTTCAGAACCATCACATATCTGTGCAAGTAAGAGGAAGATGGAGGCTAGTACTGAAGATAATGGATTAGACTTGGAGCTTCGACTTGGTCGTCACCCATAG 492 0.4654 MGTGKYYDCVFCKRGFTTAQALGGHMNIHKKDRASKKGSLPPPRSIKVGDKYLNLKPYPSIHNHRLIRPHFHSAAPEIPADHQDHYLAIAGPSRSSGLVDRLTYNAHRYKGTDQRGCNLLGDWRPDSSLLRSEPSHICASKRKMEASTEDNGLDLELRLGRHP* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02021 163 MobiDBLite consensus disorder prediction 141 163 - -
Pte6g02021 163 MobiDBLite consensus disorder prediction 27 46 - -
Pte6g02021 163 ProSitePatterns Zinc finger C2H2 type domain signature. 9 29 IPR013087 -
Pte6g02021 163 Gene3D Classic Zinc Finger 2 51 - -
Pte6g02021 163 PANTHER OS07G0101800 PROTEIN 5 162 - -
Pte6g02021 163 SUPERFAMILY beta-beta-alpha zinc fingers 4 34 IPR036236 -
Pte6g02021 163 ProSiteProfiles Zinc finger C2H2 type domain profile. 7 34 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02021 Pte-Chr6 36639210 36640271 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02021 7 36 C2H2 Transcription Factor Family AT5G43540 76.667 2.27e-12 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte6g02021 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02021 - - qsu:111987537 117.857