Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02019 ATGACATCTGGAGCTGGCAACAATGGCTCAAGCATTGGCAGTGACTCCCTTTGCGGGTTGTTGCTGCATACACCAGATCATGATCGCTGTGAGGCTATTGTCACAATAGCATATGAAGCTCAGGCACGAATCAGAGACCCCGTTTATGGCTGTCTTTCTCACATCTTTGCTTTGCAAAAGCAGGTGGCATATTTGCAAGCACAACTGATGCAAATGAAGGCTCAGTTGGCACAGAACCTAATTGATCCCACGAACTATGAGAATCACTGGTCTGAGAATATTACTGCCAAAACCATTAACTCGGGACATCCCACTTATAATCACATGAACCCTATGTCACCTCTCAAACTCACTTGGATCCATTGA 366 0.4536 MTSGAGNNGSSIGSDSLCGLLLHTPDHDRCEAIVTIAYEAQARIRDPVYGCLSHIFALQKQVAYLQAQLMQMKAQLAQNLIDPTNYENHWSENITAKTINSGHPTYNHMNPMSPLKLTWIH* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02019 121 Pfam Lateral organ boundaries (LOB) domain 13 73 IPR004883 -
Pte6g02019 121 PANTHER LOB DOMAIN CONTAINING PROTEIN 17 97 - -
Pte6g02019 121 ProSiteProfiles LOB domain profile. 1 76 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02019 Pte-Chr6 36633539 36634229 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02019 12 115 AS2 family AT2G42430 47.934 3.60e-32 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte6g02019 LOB 3.3e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02019 K13944 - qsu:111987550 123.25