Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02018 ATGACAGGATCTGGTTCTCCTTGTGGAGCCTGCAAGTTCTTGAGAAGGAAATGTGCGAGAGGTTGTATCTTTGCGCCTTACTTTTCTCATGAACAGGGAGCTACTCACTTTGCTGCCATTCATAAGGTCTTCGGTGCAAGTAATGTGTCGAAGCTCCTAGCCCACCTCCCTGTGAACGATAGATGCGAAGCTGCCATTACCATCTCATACGAAGCTCAAGCTAGACTCCAGGATCCAATCTATGGCTGTGTTTCTCATATTTTTGCCCTTCAACAACAGGTGGTTAGTCTACAAGCCCAACTAGCTCTTCTGAAAGAACAAGCAGGTCAAACCTTTCCGCACTACTCTGCAACTATAAACCCTAATGAAAGACACAATAGAAAACCTGACATTCAGCTACAAGACGTACAAAATTGGTTTCGATCAGATAATTCCAACTTGGTGGGGCCACAGTTTCTTCCTAACTTCTCTAGGAATTTAACGACAACGGAATACGATGAGAACGGATATATGGACATCAAGCCTTCGGTGAACTATGAAAATTCATCGGGGTCTCTAGAGGAAAATGTTTCATTCAGCTCAAGCTTTGAGGGCTCTTCTCCTTCCATGTCTTCTTATGACATGCAAACTCTAAACAGGACCTGCTGGTCCTTCCAGGAAGTAGATGACCTCCAATCAGTAGCTTTTGGTTATAATATTCGGCATTGA 708 0.4393 MTGSGSPCGACKFLRRKCARGCIFAPYFSHEQGATHFAAIHKVFGASNVSKLLAHLPVNDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLALLKEQAGQTFPHYSATINPNERHNRKPDIQLQDVQNWFRSDNSNLVGPQFLPNFSRNLTTTEYDENGYMDIKPSVNYENSSGSLEENVSFSSSFEGSSPSMSSYDMQTLNRTCWSFQEVDDLQSVAFGYNIRH* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02018 235 Coils Coil 87 107 - -
Pte6g02018 235 Pfam Lateral organ boundaries (LOB) domain 7 105 IPR004883 -
Pte6g02018 235 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Pte6g02018 235 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02018 Pte-Chr6 36624609 36625442 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02018 7 148 AS2 family AT3G58190 68.493 1.44e-66 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte6g02018 LOB 2.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02018 K13945 - tcc:18613179 290.041