Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02010 ATGGTTAGAGCTCCTTGCTGTGAGAAAATGGGGTTGAAGAAAGGACCATGGACTCCGGAAGAAGATCAAATACTCGTAAATTATATTATGGCTCATGGCCATAGCAACTGGCGTGCTCTGCCCAAACAATCAGGCTTGTTGAGGTGTGGAAAGAGTTGCAGACTCAGATGGAAAAACTACCTCAGGCCTGATATTAAACGAGGTAATTTTACAAGGGAAGAAGAGGATACCATCATCAAGCTTCATGAGATGTTGGGAAACAGATGGTCGGCAATAGCAGCAAGATTACCAGGACGGACAGATAATGAGATAAAGAATGTGTGGCATACCTACTTAAAGAAGAGACTTGAGCAAAGGCATCAGCATGAGGTGTCCGACACAACAGGAAATCCCATGAAAGCTTTGAACTTGGACATCGACGCCAAAAAAGAACGAGACCCCGTGAATGTAAATACTATTCACATGACAGAGACTGATGAAAGCGAGGAACCGAGGCAACCACTCTCTCCTTCGCAGTCTTCCTCGTCCAATGACGCCATCACATCGTCCAACATTACCAAGAACAGTGACGACATGAATGAAAACGAAAACAACAATAGTACTACTGTCGATGGCAGTAGCTCTACCACCATGCATCTCGAATGTCATTGGGATTTTCCACATGTTGATGAGTCTTTCTGGTCAGAGGTATTATCAGTCGACAGTACTATTGGTGATCAAAACAATGCTGATGTCAGTAAGGACTCTCAGTGTGTGGGCGTCGATGCCGAACCGCAATGGCAGCTTCAATTTTCTCCATGGGTGGCCATGGAACCAATCGGTGGTCAAAGTACACCAAAGGATACGATTGGGAACATGGATTTTTGGTTGGATCTTTTTACAAGTGCAACGTTACCAGAAATGTGA 906 0.4459 MVRAPCCEKMGLKKGPWTPEEDQILVNYIMAHGHSNWRALPKQSGLLRCGKSCRLRWKNYLRPDIKRGNFTREEEDTIIKLHEMLGNRWSAIAARLPGRTDNEIKNVWHTYLKKRLEQRHQHEVSDTTGNPMKALNLDIDAKKERDPVNVNTIHMTETDESEEPRQPLSPSQSSSSNDAITSSNITKNSDDMNENENNNSTTVDGSSSTTMHLECHWDFPHVDESFWSEVLSVDSTIGDQNNADVSKDSQCVGVDAEPQWQLQFSPWVAMEPIGGQSTPKDTIGNMDFWLDLFTSATLPEM* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02010 301 CDD SANT 69 112 IPR001005 -
Pte6g02010 301 MobiDBLite consensus disorder prediction 165 208 - -
Pte6g02010 301 FunFam Transcription factor MYB15 68 142 - -
Pte6g02010 301 CDD SANT 16 61 IPR001005 -
Pte6g02010 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pte6g02010 301 MobiDBLite consensus disorder prediction 154 208 - -
Pte6g02010 301 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Pte6g02010 301 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pte6g02010 301 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pte6g02010 301 Gene3D - 11 67 - -
Pte6g02010 301 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pte6g02010 301 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 237 - -
Pte6g02010 301 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Pte6g02010 301 FunFam MYB-related transcription factor 13 66 - -
Pte6g02010 301 Gene3D - 69 136 - -
Pte6g02010 301 SMART sant 66 114 IPR001005 -
Pte6g02010 301 SMART sant 13 63 IPR001005 -
Pte6g02010 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02010 Pte-Chr6 36569124 36570777 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02010 1 295 MYB Transcription Factor Family AT2G31180 47.119 3.70e-75 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte6g02010 Myb_DNA-binding 2.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02010 K09422 - tcc:18613146 308.145