Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01994 ATGGATTCTGCGAGGAGTTGGCTTCATAAATTTCAACCAAGGGACATAATGAGATCATCCTCCAGGAAAAAGGATGGCAAAGATGATTCCAGTTCACAAGATGATGAAGCACTTTCCAGCACCACCAAGCAGAAAGTTATTGCGGCCAAACAATATATTGAGAATCATTATAAGGAACAAATGAAAATTCTTCAAGAGCGGAAGGAAAGACGGAACATCTTGGAAAAGAAATTAGCTGATGCAGATGTCTCTGAAGAAGATCAAGATAACCTTCTCAAATTTTTGGAGAAGAAAGAAACTGAATACATGCGCCTACAAAGGCATAAGATAGGTGTTGATGATTTTGAGTTACTGACTATGATAGGCAAAGGTGCATTTGGAGAGGTTAGAATCTGCAGGGAAAAGACAACAAGCCATGTATATGCAATGAAGAAGCTTAAAAAATCAGAGATGCTTCGTAGAGGCCAGGTGGAACATGTGAGAGCTGAAAGGAATTTGCTGGCGGAAGTCGATAGTAATTGCATTGTTAAACTATACTCTGCTTTCCAAGATGAAGAGCACCTTTATCTCATTATGGAATACCTTCCGGGTGGAGATATGATGACTTTGCTCATGAGAAAGGATGTCTTAACTGAAAATGAAGCTAGATTTTATGTTGGGGAAACGGTTTTGGCAATTGAATCTATTCACAAGCATAACTACATCCATAGGGACATAAAGCCTGATAATTTGTTACTCGATAGATATGGGCACTTGCGACTCTCAGATTTTGGACTATGTAAACCTTTAGATTGCAGTAAACTTGAAGAGGAGGACTTCTCTGTACGTCAAAATATTAATGGAAGTGCCCAGAATGACGATGGCTCTTCTACTCCCAGGCGTTCTCAACAAGAACAACTACAACACTGGCAAAAGAATCGAAGGATGCTTGCTTACTCCACTGTTGGCACTCCAGACTACATTGCTCCAGAAGTTCTCCTTAAAAAAGGCTACGGTATGGAATGTGATTGGTGGTCTCTTGGTGCAATTATGTTTGAAATGCTAGTGGGTTATCCACCATTTTATTCTGATGATCCATTGACAACTTGTAGAAAGATAGTAAACTGGAGGAGTCATCTGAAATTCCCTGAAGAGGCAACACTCTCTTCAGAGGCTAAGGATCTTATCTGTAAGCTGTTGTGCAATGTCAATCAAAGGTTGGGATCGAAAGGTGCTGACGAAATAAAGGTCCATCCTTGGTTTAAAGGTATTGAATGGGATAAGTTATATCAGATGGAAGCTGCGTTTATTCCCGAGGTCAATGATGAGTTAGATACACAAAATTTTGAGAGCTTTGAAGAGTCCAATGACCATACTCAACCAAGATCCAAATCTGGGCCATGGAGAAAGATGTTGTCGTCGAAGGACGTAAACTTTGTTGGGTACACGTATAAGAATTTTGAAATTGTCAATGATTACCAAGTTCCTGGAATGACCGAGCTGAAGAAGAAAAGTTCAAAATCAAAGAGGCCATCTATCAAGTCACTGTTCGAAAATGAGTCAGAGGGATCAGAGGCATCTGAAGCTTCAGACTCTACTGCTAACAATCAGTCTGCTCAAGGAAGTTTCTAA 1611 0.401 MDSARSWLHKFQPRDIMRSSSRKKDGKDDSSSQDDEALSSTTKQKVIAAKQYIENHYKEQMKILQERKERRNILEKKLADADVSEEDQDNLLKFLEKKETEYMRLQRHKIGVDDFELLTMIGKGAFGEVRICREKTTSHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYSAFQDEEHLYLIMEYLPGGDMMTLLMRKDVLTENEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHLRLSDFGLCKPLDCSKLEEEDFSVRQNINGSAQNDDGSSTPRRSQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMFEMLVGYPPFYSDDPLTTCRKIVNWRSHLKFPEEATLSSEAKDLICKLLCNVNQRLGSKGADEIKVHPWFKGIEWDKLYQMEAAFIPEVNDELDTQNFESFEESNDHTQPRSKSGPWRKMLSSKDVNFVGYTYKNFEIVNDYQVPGMTELKKKSSKSKRPSIKSLFENESEGSEASEASDSTANNQSAQGSF* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01994 536 Gene3D Transferase(Phosphotransferase) domain 1 199 270 - -
Pte6g01994 536 Gene3D Transferase(Phosphotransferase) domain 1 306 434 - -
Pte6g01994 536 CDD STKc_NDR_like 113 478 - -
Pte6g01994 536 FunFam Non-specific serine/threonine protein kinase 199 266 - -
Pte6g01994 536 SMART serkin_6 115 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01994 536 ProSiteProfiles Protein kinase domain profile. 115 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01994 536 Pfam Protein kinase domain 116 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01994 536 MobiDBLite consensus disorder prediction 495 509 - -
Pte6g01994 536 Pfam Protein kinase C terminal domain 433 477 IPR017892 GO:0004674|GO:0005524|GO:0006468
Pte6g01994 536 SUPERFAMILY Protein kinase-like (PK-like) 89 466 IPR011009 -
Pte6g01994 536 FunFam Non-specific serine/threonine protein kinase 86 198 - -
Pte6g01994 536 MobiDBLite consensus disorder prediction 493 536 - -
Pte6g01994 536 ProSiteProfiles AGC-kinase C-terminal domain profile. 415 487 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pte6g01994 536 SMART pkinase_C_6 415 479 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pte6g01994 536 MobiDBLite consensus disorder prediction 1 34 - -
Pte6g01994 536 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Pte6g01994 536 FunFam Non-specific serine/threonine protein kinase 313 432 - -
Pte6g01994 536 ProSitePatterns Protein kinases ATP-binding region signature. 121 144 IPR017441 GO:0005524
Pte6g01994 536 MobiDBLite consensus disorder prediction 1 42 - -
Pte6g01994 536 Gene3D Phosphorylase Kinase; domain 1 86 198 - -
Pte6g01994 536 PANTHER SERINE/THREONINE-PROTEIN KINASE 30 472 - -
Pte6g01994 536 MobiDBLite consensus disorder prediction 510 536 - -
Pte6g01994 536 CDD MobB_NDR_LATS-like 49 110 - -
Pte6g01994 536 MobiDBLite consensus disorder prediction 279 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01994 Pte-Chr6 36451395 36457557 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01994 1 510 AGC Kinase Gene Family AT2G20470 77.247 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Pte6g01994 Pkinase 9.4e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01994 K08790 - qsa:O6P43_006882 910.598