Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01992 ATGGAACATGTGGCTGGTGGAAAATTCAAGCTTGGGAGGAAGATCGGGAGTGGGTCATTTGGGGAGCTCTATTTGGGGGTTAATGTACAAACTGGAGAAGAGGTGGCAGTTAAGCTGGAACCATCGAAGACCAAACATCCACAGCTTCATTACGAGTCAAAATTATACGTGCTGCTTCAAGGAGGAACTGGAATTCCGCACATCAAGTGGTTTGGGGTTGAAGGAGAGTACAATGTTATGGTGATCGACCTCCTAGGACCAAGTCTAGAAGATTTGTTTAATTACTGCAATCGGAAGTTCTCATTGAAAACAGTGTTGATGCTTGCCGATCAGTTCATAAATAGGGTGGAGTACATGCATTCCAAAGGTTTTCTTCACCGTGATATAAAGCCTGACAATTTTCTAATGGGCCTTGGTCGTAAAGCAAACCAGGTGTACATAATTGACTATGGCCTTGCGAAGAAGTACAGAGATCTTCAGACTCATAAGCACATACCTTATAGCATGGTCTGGGAAGCAACTTATTGCAATTTCAAGAGTAATCGGGTGCGCCCCGATACAGAGAAGGGGATAAGTACATCTCAATATGGTAGCTGTTCCAGAAAAGCTATGATTTCAACAGGCAGGCCAAGTTCATCGGGTGATCATCCGAGTGAAGGGCGTCGACTGGTAACAAGTGCTAGTCGACTAGGTTCAAGTGTTGGACGGCAATCTACTGCACATAGGACTCCAACTGTCTACGACACTAAGCATACTTCACTTTCAGGTATATCAACTTTGAAAAGCAAACGCGATGATCCTCTAAGGAGCTTTGAGCTGCTTTCAATCAGGAAATAG 837 0.4421 MEHVAGGKFKLGRKIGSGSFGELYLGVNVQTGEEVAVKLEPSKTKHPQLHYESKLYVLLQGGTGIPHIKWFGVEGEYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQFINRVEYMHSKGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYSMVWEATYCNFKSNRVRPDTEKGISTSQYGSCSRKAMISTGRPSSSGDHPSEGRRLVTSASRLGSSVGRQSTAHRTPTVYDTKHTSLSGISTLKSKRDDPLRSFELLSIRK* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01992 278 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01992 278 MobiDBLite consensus disorder prediction 200 214 - -
Pte6g01992 278 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Pte6g01992 278 Gene3D Phosphorylase Kinase; domain 1 1 85 - -
Pte6g01992 278 SUPERFAMILY Protein kinase-like (PK-like) 5 169 IPR011009 -
Pte6g01992 278 Gene3D Transferase(Phosphotransferase) domain 1 86 197 - -
Pte6g01992 278 MobiDBLite consensus disorder prediction 225 250 - -
Pte6g01992 278 MobiDBLite consensus disorder prediction 200 250 - -
Pte6g01992 278 FunFam Putative Casein kinase I 1 85 - -
Pte6g01992 278 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Pte6g01992 278 SMART serkin_6 9 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01992 278 Pfam Protein kinase domain 10 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01992 278 PANTHER CASEIN KINASE-RELATED 9 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01992 Pte-Chr6 36440536 36445120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01992 2 173 MAP Kinase Kinase Kinase AT3G06030 27.660 6.20e-12 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Pte6g01992 Pkinase 1.9e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01992 K08960 - fve:101303986 333.183