Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01982 ATGACTTCTGACCTTCACAATGGAACAGTCTTTGCATTCTTTCGACCAATAAATTATCATCAATATAATGTCAGGTTTGATGCGTACTTCCTGAACATCAAGAAACCGTGTAGCAGCAATCAATCTGATTTTGATACTAACTGTACCAAGGAGCTTAGGAACGTGGCTGTCTCTGGGCCATGCTCTTCATCAATGCCTGCCCTTCCAACAGTAATGGAGGAGTCATACCCCAAGTTGCCCGACTCTCAGCAGGTTTCAGCAGAAAGAGAGCTTTTGACAACACCTCTGACCCATTCTACTAATATAAATTCCAGTGAAGTGGCCGGTCACATAATTTCTTCTGCACCTGGACACTCAATTGATCTTCATTATTCATCTGTAGCACCCCCAGAAAACCATCCCAGAGATGCTCAATTTATTTTACAACCATCAAGTGGACTAGTATCTTCGCCATTTTCGAATTCTTCATATTCTGGGCCTGTAACATCTAGAAACATACGTCATTATGCCAAAGATAACACCGCCTCCTGGCACACGGACTCATTTCCAAACTTCGATTATGTTCCCTCAAATACTTCTCTTGAGCATGTTCAGATAGAAGGCAACAGCGGCTGTGCTCTGGTGGCTGAGGAATGTTTTAAGAAAAATGATTGGCAGGAATGGGCAGATCAACTAATCACTGATGACAATTCATTGACTTCTAGCTGGAATGAGCTCCTTGGAGATGATGCTGGAGATCTGGAACCAAAGATGGCATATCAGGTTCCGAAATCATCTAATATTCCATCCCAACTGTCCCAAGGCCAAAACCCAGTTCCTGCTCCTTTGGGAGAGACTCGCTCTGTTGCTACCTTCTCATCCTCAGCAAATACAGCCCCAGCCAAGCCTCGCATGCGATGGACACCCGAACTCCATGAAGCCTTTGTGGATGCTGTGAACCAACTTGGTGGCAGTGAAAGAGCTACTCCTAAGGGAGTCTTGAAGCAAATGAAAGTTGAAGGCCTGACTATATACCACGTGAAAAGCCATTTGCAGGTTTGTGGACATTACTTTCACCAATATTTCTATTTTTTCATGCACTTCATATATAAGTTTGATCATGAATTGCAGAAATATAGGACAGCCAGGTACAGACCAGAGTCATCAGAAGGTACCTTAAATTTTCCTTTTTCCCCTCCTAATCTGCTGCTTCAATGA 1197 0.4344 MTSDLHNGTVFAFFRPINYHQYNVRFDAYFLNIKKPCSSNQSDFDTNCTKELRNVAVSGPCSSSMPALPTVMEESYPKLPDSQQVSAERELLTTPLTHSTNINSSEVAGHIISSAPGHSIDLHYSSVAPPENHPRDAQFILQPSSGLVSSPFSNSSYSGPVTSRNIRHYAKDNTASWHTDSFPNFDYVPSNTSLEHVQIEGNSGCALVAEECFKKNDWQEWADQLITDDNSLTSSWNELLGDDAGDLEPKMAYQVPKSSNIPSQLSQGQNPVPAPLGETRSVATFSSSANTAPAKPRMRWTPELHEAFVDAVNQLGGSERATPKGVLKQMKVEGLTIYHVKSHLQVCGHYFHQYFYFFMHFIYKFDHELQKYRTARYRPESSEGTLNFPFSPPNLLLQ* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01982 398 FunFam Myb family transcription factor 294 350 - -
Pte6g01982 398 NCBIfam myb-like DNA-binding domain, SHAQKYF class 295 346 IPR006447 GO:0003677
Pte6g01982 398 SUPERFAMILY Homeodomain-like 293 347 IPR009057 -
Pte6g01982 398 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 268 383 IPR044848 GO:0003700
Pte6g01982 398 Gene3D - 294 350 - -
Pte6g01982 398 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 292 352 IPR017930 -
Pte6g01982 398 Pfam Myb-like DNA-binding domain 297 345 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01982 Pte-Chr6 36350493 36355596 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01982 62 383 G2-like Transcription Factor Family AT4G28610 38.554 9.64e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte6g01982 Myb_DNA-binding 3.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01982 - - gmx:100793593 350.132